Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04304 ATGGGGATCATTTCCTTGTTCTTCTACTCTCTATTTTATCTTTCAATATTTTTCATCATAAGGCTTTTGTTCCAATCAAGAAAATTCAAAAACCTCCCACCAGGTCCGACTTCTCTTCCCATAATAGGCGACCTTCACCATCTCAAACGCCCCCTCCACCGTACTTTTAAGGGACTCACCGAGAAGTATGGCAACGTAATTTCCCTTTGGTTTGGATCGCGTCTTGTCGTTGTTGTATCTTCTTTATCGGAATTTCAACAATGTTTTACAAAAAACGACGTTGTCCTAGCAAATAGACCAAAGTTTTTGTCAGGAAAATATATCTTCTACAACTATACAACCTTAGGTTCTACAGCTTACGGAGAACACTGGCGCAATCTTCGTCGTATTACTTCTCTTGATGTTCTTTCAAACCACCGGATAAACAATTTTGCTGGAATCCGAAAGGATGAGACTCAGAGGTTGATCACCAAGTTGGCTGAAGATTCATCAACTGATTTTGCTGAAGTAGAACTCACTTTTCGATTCTTTGATATGACGTTTAACAACATCATGAGAATGATCTCTGGAAGGAGGTACTATGGAGAAGATTGTGATATGTCTGATCTTCAAGAAGCAAGTCAATTTAGAGATATGGTATCACAATTGTTGCAATTATCAGGAGCGAATAATAAGACCGATTTCATGCCTTTGCTTAAGTTTCTTGATTTTGAAAACTTGGAGAAGAGAGTCAAACATATTGGTGAAAAATGTGATGAGTTCTTGAGAGGACTCCTTGAAGAGCAACGCAACAAGAAGGAACGTACAAACACCATGATAGATCATCTTCTAAATATGCAAGAATCACAACCAGAGTACTACACTGACCAAATCATCAAAGGACTTGCTTTGGCCATGCTTCTTGCTGGAACCGATTCATCAGCTGTAACTTTAGAGTGGTCGATAGACCCTGAAACATGGAGTGAAGCCACGACATTCAAACCAGAGAGGTTCGAGAAAACAGGAGAGCTGGAGAAAATGATTGCGTTTGGAATGGGAAGAAGGGCTTGCCCTGGAGAAGGCTTGGCTATGCGTGCAATTAGCATGACTTTGGCATTATTGGTTCAATGTTTTGATTGGAAACTTACAGGTGATGGCAAGATTGATATGTCCGAGCGAGATGGTTTCACCTTGACAAAATTGGTGCCATTAAAGGCCATGTGTAAAACTCGCCCCGTTGTCAACAAGCTTCTAAGTAATTAA 1242 0.4026 MGIISLFFYSLFYLSIFFIIRLLFQSRKFKNLPPGPTSLPIIGDLHHLKRPLHRTFKGLTEKYGNVISLWFGSRLVVVVSSLSEFQQCFTKNDVVLANRPKFLSGKYIFYNYTTLGSTAYGEHWRNLRRITSLDVLSNHRINNFAGIRKDETQRLITKLAEDSSTDFAEVELTFRFFDMTFNNIMRMISGRRYYGEDCDMSDLQEASQFRDMVSQLLQLSGANNKTDFMPLLKFLDFENLEKRVKHIGEKCDEFLRGLLEEQRNKKERTNTMIDHLLNMQESQPEYYTDQIIKGLALAMLLAGTDSSAVTLEWSIDPETWSEATTFKPERFEKTGELEKMIAFGMGRRACPGEGLAMRAISMTLALLVQCFDWKLTGDGKIDMSERDGFTLTKLVPLKAMCKTRPVVNKLLSN 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04304 413 PANTHER CYTOCHROME P450 82C3-RELATED 316 404 - -
Trre7g04304 413 Gene3D Cytochrome P450 22 314 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g04304 413 Coils Coil 259 279 - -
Trre7g04304 413 SUPERFAMILY Cytochrome P450 26 404 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g04304 413 Pfam Cytochrome P450 33 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g04304 413 Pfam Cytochrome P450 316 392 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g04304 413 Gene3D Cytochrome P450 315 408 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g04304 413 PRINTS E-class P450 group I signature 309 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g04304 413 PRINTS E-class P450 group I signature 350 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g04304 413 PRINTS E-class P450 group I signature 340 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g04304 413 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g04304 413 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 343 352 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04304 Trre-Chr7 50983067 50984718 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g04304 313 412 Cytochrome P450 AT4G37370 51.961 7.69e-31 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04304 K13260 - ag:BAA22422 514.227