Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04295 ATGGATAACAAAATAGTTGATGGTGTTAATGAAATTGAAAGTGAAAGTACTGCGGAGACCGAGACTGGGATTGAGAGCAAAAATTGTAGCAGTAGTAGAGAAAGTGAAGATGAGAATGAATTGGAAGAAGATGATTCAGAGGATATTACTAGCTGGGTCATTCATGATGATGAATCTCGACGAAGATCTGATAGGTCAAGAAACGACCTTGAGTTAATAAAAACATGTGCTTGGTGGAATAATGGACTATTGTCCTCTGTGTTTGAGTTGGTCTTGGTTAACTATCACCAGATACAAGAGTATCATAGGAAGCACCCAGTTGCACGTGTTGCTGATGCTAATGACGATTTTGAAGCCCTGCTTAAAGAGGAACTTCAAATTGATATTGGATATAAGAAAGAGATTCTTCTAGAAAAACATTTGGTTAAGCGTGAAGATGTTTTCTGGCGAATCGGGTTGAAGAGAAACATAAAAAGCCAATCAAATGAAGCAGTTGATCATGAATACAAATACAATCCAAAGCACATATCGACATTGCAACCAAAGTCACAAGCCGAAACCGATAAATCCTCCGCGGAATTTGTTTCGCTTTGTAGAAGTAGCACTCCTGATCAGGTCAGAAGATTCCACTTTACAATGTGGCACATAGCAGAGCTGGAGATAAAGGAAATGACATAA 678 0.3864 MDNKIVDGVNEIESESTAETETGIESKNCSSSRESEDENELEEDDSEDITSWVIHDDESRRRSDRSRNDLELIKTCAWWNNGLLSSVFELVLVNYHQIQEYHRKHPVARVADANDDFEALLKEELQIDIGYKKEILLEKHLVKREDVFWRIGLKRNIKSQSNEAVDHEYKYNPKHISTLQPKSQAETDKSSAEFVSLCRSSTPDQVRRFHFTMWHIAELEIKEMT 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04295 225 MobiDBLite consensus disorder prediction 13 29 - -
Trre7g04295 225 MobiDBLite consensus disorder prediction 1 50 - -
Trre7g04295 225 MobiDBLite consensus disorder prediction 36 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04295 Trre-Chr7 50893393 50896240 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g04295 85 124 C2H2 Transcription Factor Family AT5G06160 47.500 9.65e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04295 K12827 - gmx:100790647 91.2781