Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04294 ATGGAAGGTTTTCACCCTTCAATGAATATGAATATGAGTATGAACCCTTCTTTTTCATACACTTTTCCTATCACTGGTTCTAGTGCCATAACCAACAACATCACTACTACTGCTACTGCTGCTACATTCAGCAACACTACTCCATGGATGAATAGCAGAATATGGAGTAAACTTCCACAAAGATTACTTGATCGTATCATAGCTTTTCTTCCTCCACCTGCTTTCTTCCGTGCACGTTCTGTTTGTAAGAGATTCTATTCTCTTCTCTTTTCCAACACTTTTCTTGAACTTTACCTTCAAGTTTCACCTCGTTTTCACTGGTTTTTCTTCTTCAAACACAAAACCAGATCAAAAACTCACATCTACAAAAACATGCCTGATAACAACAACAACAACAACAGTAACAACAACTCCTTTGAAGGTTATCTCTTTGATCCTAATGAAATGACATGGTACCGTATTTCATTTGGTTTAATAATACCTTCTGGTTTTTCACCATCTTCATCTTCCTCTGGTTTACTCTGTTTTGTTTCTGATGAATCTGGTCCAAAAACAATGCTTTTATGTAACCCTTTACTTGGTTCAATAACTCAGTTACCACCAACTTTGCGTCCAAGACTTTTTCCATCATTAGGCTTAACAATTACTCCAACTTCCATTGATGTTACTGTTGCTGGTGATGACATGATATCACCATATGCAGTTAAAAACTTAACTTCTGAAAGTTTTCATATTGATGCAAGTGGGTTTTATTCAATGTGGGGAACAACTTCATCATTACCAAGATTATGTAGTCTTGAATCAGGTAGAATGGTTTATTCAAATGGAAAATTTTACTGCATGAATTCTAGTCCTTTTAGTGTTTTAGCTTATGATGTTGTTACAAACACTTGGTTCAAAATTCAAGCACCTATGAGGAGATTCTTAAGATCACCAAATCTTGTTGAATGTAAAGGTAAGTTATTACTTGTTGCTGCTGTTGAGAAAAGTAAGTTGAATGTTCCAAAAAGTTTAAGGGTTTGGTGTTTACAAAGTTGTGGAAGTGTTTGGTGTGAAACTGAGAGAATGCCACAACAACTTTATGTTCAGTTTTCTGAGATGGAAAATGGGAATGGATTTGAGTGTGTTGGGAATGGTGAGTTTATTATGATTATGATTAAAGGAAGTGATAATAAAGGTTTAGTTTATGATATTGGAAAAAAGAAATGGCAATGGATTCCAACTTGTCCTTATGTTGGTTATGATGGATTTGAGTTGCATGGTTTTGCTTATGAACCTAGATTGGCTACACCTGTTACTGCTCTTCTTGATCAATTGGTTATGCCTATGCCTCTTCCACAGTTTTAA 1347 0.3534 MEGFHPSMNMNMSMNPSFSYTFPITGSSAITNNITTTATAATFSNTTPWMNSRIWSKLPQRLLDRIIAFLPPPAFFRARSVCKRFYSLLFSNTFLELYLQVSPRFHWFFFFKHKTRSKTHIYKNMPDNNNNNNSNNNSFEGYLFDPNEMTWYRISFGLIIPSGFSPSSSSSGLLCFVSDESGPKTMLLCNPLLGSITQLPPTLRPRLFPSLGLTITPTSIDVTVAGDDMISPYAVKNLTSESFHIDASGFYSMWGTTSSLPRLCSLESGRMVYSNGKFYCMNSSPFSVLAYDVVTNTWFKIQAPMRRFLRSPNLVECKGKLLLVAAVEKSKLNVPKSLRVWCLQSCGSVWCETERMPQQLYVQFSEMENGNGFECVGNGEFIMIMIKGSDNKGLVYDIGKKKWQWIPTCPYVGYDGFELHGFAYEPRLATPVTALLDQLVMPMPLPQF 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04294 448 ProSiteProfiles F-box domain profile. 52 101 IPR001810 GO:0005515
Trre7g04294 448 PANTHER BNACNNG10540D PROTEIN 47 429 - -
Trre7g04294 448 Gene3D - 128 421 IPR015915 GO:0005515
Trre7g04294 448 SUPERFAMILY Galactose oxidase, central domain 135 412 IPR011043 -
Trre7g04294 448 FunFam protein UNUSUAL FLORAL ORGANS 51 95 - -
Trre7g04294 448 Pfam F-box domain 55 89 IPR001810 GO:0005515
Trre7g04294 448 Gene3D - 50 95 - -
Trre7g04294 448 SUPERFAMILY F-box domain 48 142 IPR036047 GO:0005515
Trre7g04294 448 SMART fbox_2 58 98 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04294 Trre-Chr7 50872490 50873836 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04294 - - cam:101505902 702.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g04294 7 50872490 50873836 Trre7g04294 7 50872490 50873836 ECH