Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04285 ATGGCTGAAAATAATTCTCATTCTCAATCTCCAATACCATGTAATAATCATGAACAAGTAGCTGGTTTTGATTGGATGGTTCTAGTAGCAGCTATTCTATGTGCCATTATTTGTGCTCTTGGTCTTAACACAATGTTACAATGTGCTTTTCAATGTATTGGTCGTGTAGTAACTGAACCTATGCAATGGATTGCTACTTGGAGGTTAAATTCAGGAATCAAGAAAAAAGAAATGGTAGCTTTGCCAACTTCAACTTATTGTGATGATTTAGGTTCTCCATCTTCAGCTTCTAGTTGTGTTATTTGTTTGGCTGAATTTTGTAATGGAGATCAGATAAGGCATCTTACTCAAGTCTAG 357 0.3557 MAENNSHSQSPIPCNNHEQVAGFDWMVLVAAILCAIICALGLNTMLQCAFQCIGRVVTEPMQWIATWRLNSGIKKKEMVALPTSTYCDDLGSPSSASSCVICLAEFCNGDQIRHLTQV 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04285 118 PANTHER RING-H2 FINGER PROTEIN ATL78 13 116 IPR044602 GO:0016567|GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04285 Trre-Chr7 50803020 50803460 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g04285 7 117 C3H Transcription Factor Family AT1G20823 33.058 5.13e-13 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04285 - K19040 tpra:123918739 203.756