Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04265 ATGATGAAAGGTGAGAAAGTTCCTGCATGGTTAGAAAGATTAATGGCTGAAACATTCTTTGGTGTTTGTGGGGTCCATATTAATAGAAGGAAGAACGAGAACAACATTTTTTGCTTACAATGTTGTCTTGCCATCTGCCCTCACTGTCTCCCTTCTCACCCCCATCATCCCCTTCTTCAGGTGAGAAGGTATGTTTACCATGACGTGGTTCGATTGGGTGATCTTGAAAAACTCATCGATTGTTCCAATATTCAGCCATATACAATTAACGGTGCAAAAGTGGTATTCTTAAATGAGAGGGTGCAGTCAAGGTCATGCAAAGGCAGCAGTAGCAGTAATGCCAACTCTTGCTGCTTTTGTGACAGGATTCTTCAGGAGCCCTTCCATTTCTGTTCTCTCTCATGCAAGGTTGATAACATGGTATGCATGGGTGAAAGCTTGTCGAGCATATTACATGGATTCCTTGAATCAGATTTTTCATACTCACAGTTTGAGGGTTTAAGGGTGGATAGCTCTGAAGTTATTGATGAAGATAATACCCAATTTGCCCCTACTTTTTCTTACTCCAATACTGAGGAAGCTACAAGCCATTCTATGAATAATATTTCATGTGAAGAACCCTACAATAAAAACAACAACAAAAGCAATGGTTTCTTCCTCTCTCTTGGAAGCTGCAGGAGAAAGGGTGCTCCTAAGAGATCACCTCTATCCTAG 714 0.4104 MMKGEKVPAWLERLMAETFFGVCGVHINRRKNENNIFCLQCCLAICPHCLPSHPHHPLLQVRRYVYHDVVRLGDLEKLIDCSNIQPYTINGAKVVFLNERVQSRSCKGSSSSNANSCCFCDRILQEPFHFCSLSCKVDNMVCMGESLSSILHGFLESDFSYSQFEGLRVDSSEVIDEDNTQFAPTFSYSNTEEATSHSMNNISCEEPYNKNNNKSNGFFLSLGSCRRKGAPKRSPLS 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04265 237 Pfam PLATZ transcription factor 62 137 IPR006734 -
Trre7g04265 237 ProSiteProfiles Zinc finger B-box type profile. 22 72 IPR000315 GO:0008270
Trre7g04265 237 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 3 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04265 Trre-Chr7 50638951 50646872 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Trre7g04265 PLATZ 6.4e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04265 - - tpra:123914605 420.624