Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04187 ATGTCTGATGAACATAGACAACCCTACTATCAAAACTTCATGCTAGATCATAATAATTATCATCAAAAAACAGATCAAGGATCTATTAATAACATGTTTTGTGAAAAACAATTTTCTACAAATCCTAATTTAGGTTCATCTTATGATTGTTTTGATCCATCATCTTATAATATGAGTTTCACGGAATGTTTACAAGGAGGAAACATGGATCATCACTACAATTCATCATCACTCGCGAATAATTCTCCTTTTGGAGTATTATCTCCTTCATCATCAGAAGTTTTTTCATCTGTTGATCAAGGAAATAATCAAAAACAAGAAGTAGTTGGTGGCGAAACCCTTCTTAACTCATCTATCTCTAATTCATCGTCTTCTGAAGCCGGAGGAGGAGGAGGAGGAGCAGAAGAAGAAGATTCCGGCAAGAAAAAGAAAAATATTGGACAAGTTAAAGAAGAACCGGGACAAGAAGCCACTAAAAATGGGAACAACAAGGTGGAGAAGAAGAAAGGAGAGAAGAAACAAAAGGAACCAAGATTTGCTTTCATGACAAAGAGTGAAGTTGATCAACTTGAAGATGGATATAGATGGAGAAAATATGGACAAAAAGCTGTCAAAAATAGTCCATACCCTAGGAGCTATTACAGGTGTACAACACAGAAATGCACAGTGAAAAAACGCGTAGAAAGATCATATGAAGACCCAACAACTGTGATAACAACATATGAAGGTCAGCATAATCATCCTGTCCCCACTTCTCTTAGAGGCAATGCGGCTTCAATGTTCACACCTTCTCATTTGCTATCTACACCCACCCCTTTTACATCATCCGGGTCAAACTATAATTTTCCTCAAGAACTTCTTCTCCACATGCACCATCACAACAACAATAACAACACTTTCAATAATCAATCAACAACATATGCTACTAGTAATGCTTCCATTTATTCATCATCACACAACAATAATATTAACAACTCTCTTCTTCAACAATATCAACATCAAGTACTTCCTAATAATCATGATCAATATGGACTCCTTCAAGATATTGTCCCTTCCATGTTCCTTAATAGGACCAACCATAACTAA 1086 0.3591 MSDEHRQPYYQNFMLDHNNYHQKTDQGSINNMFCEKQFSTNPNLGSSYDCFDPSSYNMSFTECLQGGNMDHHYNSSSLANNSPFGVLSPSSSEVFSSVDQGNNQKQEVVGGETLLNSSISNSSSSEAGGGGGGAEEEDSGKKKKNIGQVKEEPGQEATKNGNNKVEKKKGEKKQKEPRFAFMTKSEVDQLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCTVKKRVERSYEDPTTVITTYEGQHNHPVPTSLRGNAASMFTPSHLLSTPTPFTSSGSNYNFPQELLLHMHHHNNNNNTFNNQSTTYATSNASIYSSSHNNNINNSLLQQYQHQVLPNNHDQYGLLQDIVPSMFLNRTNHN 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04187 361 MobiDBLite consensus disorder prediction 161 178 - -
Trre7g04187 361 MobiDBLite consensus disorder prediction 116 178 - -
Trre7g04187 361 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 32 301 IPR044810 GO:0003700
Trre7g04187 361 SMART WRKY_cls 190 249 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre7g04187 361 FunFam WRKY transcription factor 57 176 250 - -
Trre7g04187 361 Pfam WRKY DNA -binding domain 191 248 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre7g04187 361 SUPERFAMILY WRKY DNA-binding domain 182 250 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre7g04187 361 MobiDBLite consensus disorder prediction 135 150 - -
Trre7g04187 361 ProSiteProfiles WRKY domain profile. 185 250 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre7g04187 361 Gene3D WRKY domain 175 251 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04187 Trre-Chr7 50043234 50044967 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g04187 51 355 WRKY Transcription Factor Family AT4G18170 48.077 2.38e-64 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Trre7g04187 WRKY 2.1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04187 - - cam:101497541 355.14