Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04171 ATGATTTTGTTGTGTCTGGACCAGGCTCACTCTAACTTGCATAAGAGAAAGTCTACTTTGATTGCTGATGGGAATCATGCTGCATTTAAGACATCAAGGAAGGGAAGCTATGTAGACACTCTTGAACAAAAGCAGGCAGAAGATATCTTTACTAGAGAAGAAAAATACAACGAGGATAACAATGACACCGGTGACGACAACAGTGAAGAAAAAGCCGGAGATGATGACGTGGTTGATGATCAGCAAGAGGAAGGAGAGTACTTACTAGTAGACGAAGGTCCTACTACAGTTACAAATGAGGATGGAAGTCACAAAGGTCTGTTCACGAAAGATGCGGATGAAGAAAATAAAATTTCTACTCGACATTTCAGCCATGGATGTCACTTAATGGAAGGAGAGATGAACCATGGAATGGAGGACTATGTTTTTGCTCAACACAAGAAGCTCAATGGTTACGACTTAGGACTCTATGCAATATTTGATGGACATGCAGGTCGCGATGTTGCAAAATATTTGCAAAGCCATCTATTTGAAAATATACTGAGTGAGCCCGATTTCTGGGAAAATCCAGTGCATGCTGTTAAGAATGCATGTAAAGCTACGGATGATGAGATTCTAGAAAACATAACCAATTCGCGTGGAGGATCAACGGCTGTGGCAGCAATACTAATTAATGGAGTAAAGCTACTGGTATTCAATGTTGGTGATTCTCGAGCAATATCGTGTAAAAATGGGATTGCAAAACAACTTACCGTGGATCACGAACCAGAGAAGGAAAAGGATCTGGTTGAGAGCAGAGGAGGTTTTGTGATTAAGAGACCTGGGAATGTTCCAAGAGTGGATGACCAGTTAGCAATGACAAGAGCATTTGGAGATGGAAACCTGAAGGAGCACATCACTGCAGAACCAGATGTGATGATTAAGAAGATTGATGAGGACACTGAATTCATCATTTTAGCAAGTGACGGTCTTTGGAAGGTGATGACAAATCAAGAGGCTTGTGACTGTATCAAGGATATTGATGATGCTCAAAAAGCAGCAAAAAAGTTAGTGGCAGAAGCAAAATACAGGGGAAGCTATGATGATATTTCATGCATAGTTGTTATGTTCTAG 1113 0.4079 MILLCLDQAHSNLHKRKSTLIADGNHAAFKTSRKGSYVDTLEQKQAEDIFTREEKYNEDNNDTGDDNSEEKAGDDDVVDDQQEEGEYLLVDEGPTTVTNEDGSHKGLFTKDADEENKISTRHFSHGCHLMEGEMNHGMEDYVFAQHKKLNGYDLGLYAIFDGHAGRDVAKYLQSHLFENILSEPDFWENPVHAVKNACKATDDEILENITNSRGGSTAVAAILINGVKLLVFNVGDSRAISCKNGIAKQLTVDHEPEKEKDLVESRGGFVIKRPGNVPRVDDQLAMTRAFGDGNLKEHITAEPDVMIKKIDEDTEFIILASDGLWKVMTNQEACDCIKDIDDAQKAAKKLVAEAKYRGSYDDISCIVVMF 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04171 370 Gene3D - 118 370 IPR036457 -
Trre7g04171 370 MobiDBLite consensus disorder prediction 63 78 - -
Trre7g04171 370 PANTHER PROTEIN PHOSPHATASE 76 368 IPR015655 GO:0004722|GO:0006470
Trre7g04171 370 ProSitePatterns PPM-type phosphatase domain signature. 156 164 IPR000222 GO:0043169
Trre7g04171 370 Pfam Protein phosphatase 2C 136 363 IPR001932 -
Trre7g04171 370 ProSiteProfiles PPM-type phosphatase domain profile. 124 370 IPR001932 -
Trre7g04171 370 SUPERFAMILY PP2C-like 121 370 IPR036457 -
Trre7g04171 370 CDD PP2Cc 123 368 IPR001932 -
Trre7g04171 370 SMART PP2C_4 114 368 IPR001932 -
Trre7g04171 370 MobiDBLite consensus disorder prediction 48 62 - -
Trre7g04171 370 MobiDBLite consensus disorder prediction 48 78 - -
Trre7g04171 370 FunFam Probable protein phosphatase 2C 39 116 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04171 Trre-Chr7 49836713 49838666 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g04171 121 370 PP2C-type Phosphatase Gene Family AT4G28400 58.964 3.64e-104 306