Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04170 ATGATTTTGTTGTGTCTGGACCAGGCTCACTCTAACTTGCATAAGAGAAAGTCTACTTTGATTGCTGATGGGAATCATGCTGCATTTAAGAAGACATCAAGGAAGGGAAGCTATGTAGACACTCTTGAACAAAAGGCAGAAGATATCTTTACTAGAGAAGAAAAATACAACGAGGATAACAATGACACCGGTGACGACAACAGTGAAGAAAAAGCCGGAGATGATGACGTGGTTGATGATCAGCAAGAGGAAGGAGAGTACTTACTAGTAGACGAAGGTCCTACTACAGTTACAAATGAGGATGGAAGTCACAAAGGTCTGTTCACGAAAGATGCGGATGAAGAAAATAAAATTTCTACTCGACATTTCAGCCATGGATGTCACTTAATGGAAGGAGAGATGAACCATGGAATGGAGGACTATGTTTTTGCTCAACACAAGAAGCTCAATGGTTACGACTTAGGACTCTATGCAATATTTGATGGACATGCAGGTCGCGATGTTGCAAAATATTTGCAAAGCCATCTATTTGAAAATATACTGAGTGAGCCCGATTTCTGGGAAAATCCAGTGCATGCTGTTAAGAATGCATGTAAAGCTACGGATGATGAGATTCTAGAAAACATAACCAATTCGCGTGGAGGATCAACGGCTGTGGCAGCAATACTAATTAATGGAGTAAAGCTACTGGTATTCAATGTTGGTGATTCTCGAGCAATATCGTGTAAAAATGGGATTGCAAAACAACTTACCGTGGATCACGAACCAGAGAAGGAAAAGGATCTGGTTGAGAGCAGAGGAGGTTTTGTGATTAAGAGACCTGGGAATGTTCCAAGAGTGGATGACCAGTTAGCAATGACAAGAGCATTTGGAGATGGAAACCTGAAGGAGCACATCACTGCAGAACCAGATGTGATGATTAAGAAGATTGATGAGGACACTGAATTCATCATTTTAGCAAGTGACGGTCTTTGGAAGGTGATGACAAATCAAGAGGCTTGTGACTGTATCAAGGATATTGATGATGCTCAAAAAGCAGCAAAAAAGTTAGTGGCAGAAGCAAAATACAGGGGAAGCTATGATGATATTTCATGCATAGTTGTTATGTTCTAG 1113 0.407 MILLCLDQAHSNLHKRKSTLIADGNHAAFKKTSRKGSYVDTLEQKAEDIFTREEKYNEDNNDTGDDNSEEKAGDDDVVDDQQEEGEYLLVDEGPTTVTNEDGSHKGLFTKDADEENKISTRHFSHGCHLMEGEMNHGMEDYVFAQHKKLNGYDLGLYAIFDGHAGRDVAKYLQSHLFENILSEPDFWENPVHAVKNACKATDDEILENITNSRGGSTAVAAILINGVKLLVFNVGDSRAISCKNGIAKQLTVDHEPEKEKDLVESRGGFVIKRPGNVPRVDDQLAMTRAFGDGNLKEHITAEPDVMIKKIDEDTEFIILASDGLWKVMTNQEACDCIKDIDDAQKAAKKLVAEAKYRGSYDDISCIVVMF 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04170 370 Gene3D - 118 370 IPR036457 -
Trre7g04170 370 MobiDBLite consensus disorder prediction 63 78 - -
Trre7g04170 370 ProSitePatterns PPM-type phosphatase domain signature. 156 164 IPR000222 GO:0043169
Trre7g04170 370 PANTHER PROTEIN PHOSPHATASE 76 368 IPR015655 GO:0004722|GO:0006470
Trre7g04170 370 ProSiteProfiles PPM-type phosphatase domain profile. 124 370 IPR001932 -
Trre7g04170 370 SUPERFAMILY PP2C-like 121 370 IPR036457 -
Trre7g04170 370 CDD PP2Cc 123 368 IPR001932 -
Trre7g04170 370 SMART PP2C_4 114 368 IPR001932 -
Trre7g04170 370 MobiDBLite consensus disorder prediction 49 78 - -
Trre7g04170 370 Pfam Protein phosphatase 2C 136 363 IPR001932 -
Trre7g04170 370 FunFam Probable protein phosphatase 2C 39 116 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04170 Trre-Chr7 49836713 49838666 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g04170 121 370 PP2C-type Phosphatase Gene Family AT4G28400 58.964 3.60e-104 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04170 - - gmx:100814772 535.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g04170 7 49836713 49838666 Trre7g04170 7 49836713 49838666 ECH