Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04169 ATGATTTTGTTGTGTCTGGACCAGGCTCACTCTAACTTGCATAAGAGAAAGTCTACTTTGATTGCTGATGGGAATCATGCTGCATTTAAGAAGACATCAAGGAAGGGAAGCTATGTAGACACTCTTGAACAAAAGCAGGCAGAAGATATCTTTACTAGAGAAGAAAAATACAACGAGGATAACAATGACACCGGTGACGACAACAGTGAAGAAAAAGCCGGAGATGATGACGTGGTTGATGATCAGCAAGAGGAAGGAGAGTACTTACTAGTAGACGAAGGTCCTACTACAGTTACAAATGAGGATGGAAGTCACAAAGGTCTGTTCACGAAAGATGCGGATGAAGAAAATAAAATTTCTACTCGACATTTCAGCCATGGATGTCACTTAATGGAAGGAGAGATGAACCATGGAATGGAGGACTATGTTTTTGCTCAACACAAGAAGCTCAATGGTTACGACTTAGGACTCTATGCAATATTTGATGGACATGCAGGTCGCGATGTTGCAAAATATTTGCAAAGCCATCTATTTGAAAATATACTGAGTGAGCCCGATTTCTGGGAAAATCCAGTGCATGCTGTTAAGAATGCATGTAAAGCTACGGATGATGAGATTCTAGAAAACATAACCAATTCGCGTGGAGGATCAACGGCTGTGGCAGCAATACTAATTAATGGAGTAAAGCTACTGGTATTCAATGTTGGTGATTCTCGAGCAATATCGTGTAAAAATGGGATTGCAAAACAACTTACCGTGGATCACGAACCAGAGAAGGAAAAGGATCTGGTTGAGAGCAGAGGAGGTTTTGTGATTAAGAGACCTGGGAATGTTCCAAGAGTGGATGACCAGTTAGCAATGACAAGAGCATTTGGAGATGGAAACCTGAAGGAGCACATCACTGCAGAACCAGATGTGATGATTAAGAAGATTGATGAGGACACTGAATTCATCATTTTAGCAAGTGACGGTCTTTGGAAGGTGATGACAAATCAAGAGGCTTGTGACTGTATCAAGGATATTGATGATGCTCAAAAAGCAGCAAAAAAGTTAGTGGCAGAAGCAAAATACAGGGGAAGCTATGATGATATTTCATGCATAGTTGTTATGTTCTAG 1116 0.4077 MILLCLDQAHSNLHKRKSTLIADGNHAAFKKTSRKGSYVDTLEQKQAEDIFTREEKYNEDNNDTGDDNSEEKAGDDDVVDDQQEEGEYLLVDEGPTTVTNEDGSHKGLFTKDADEENKISTRHFSHGCHLMEGEMNHGMEDYVFAQHKKLNGYDLGLYAIFDGHAGRDVAKYLQSHLFENILSEPDFWENPVHAVKNACKATDDEILENITNSRGGSTAVAAILINGVKLLVFNVGDSRAISCKNGIAKQLTVDHEPEKEKDLVESRGGFVIKRPGNVPRVDDQLAMTRAFGDGNLKEHITAEPDVMIKKIDEDTEFIILASDGLWKVMTNQEACDCIKDIDDAQKAAKKLVAEAKYRGSYDDISCIVVMF 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04169 371 Pfam Protein phosphatase 2C 137 364 IPR001932 -
Trre7g04169 371 ProSiteProfiles PPM-type phosphatase domain profile. 125 371 IPR001932 -
Trre7g04169 371 CDD PP2Cc 124 369 IPR001932 -
Trre7g04169 371 FunFam Probable protein phosphatase 2C 39 117 371 - -
Trre7g04169 371 ProSitePatterns PPM-type phosphatase domain signature. 157 165 IPR000222 GO:0043169
Trre7g04169 371 MobiDBLite consensus disorder prediction 36 63 - -
Trre7g04169 371 SMART PP2C_4 115 369 IPR001932 -
Trre7g04169 371 MobiDBLite consensus disorder prediction 32 79 - -
Trre7g04169 371 SUPERFAMILY PP2C-like 122 371 IPR036457 -
Trre7g04169 371 Gene3D - 119 371 IPR036457 -
Trre7g04169 371 MobiDBLite consensus disorder prediction 64 79 - -
Trre7g04169 371 PANTHER PROTEIN PHOSPHATASE 76 369 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04169 Trre-Chr7 49836713 49838666 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g04169 122 371 PP2C-type Phosphatase Gene Family AT4G28400 58.964 3.76e-104 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04169 - - gmx:100814772 539.65