Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04134 ATGAAGATATTACAGGCACAGTCCTATACAACCACTAGAAACCCATTTTCAGTCCCAACTCACTCTTTCATCAATCCCAAAATACCCATTCCTTTAAGGCATGTGGGTCCCACTTTCTCCTCCACTCTCTCACAATTCTCTATCACATGTCGCCGCCCATATCCTTTCCAACCCAAACCATTCCCCCCACCACCACCTCAACCTCCTCCTTCATCATCTTCTTCAGTAGGAAAATTGCCAGCAAAGGTTTATGTTGGTCATTCAGTTTACAAAGCAAAAGCTGTACTCACTGTGTCTCCTAGACCAGGCTCATTGAAAAAGGAATCTTTACTTATATATGAGACTAGAGGGAGTAAATTTCTAGTGTTTGTTTCAGAGTATAGTTTTGTAGAATTGTGA 399 0.416 MKILQAQSYTTTRNPFSVPTHSFINPKIPIPLRHVGPTFSSTLSQFSITCRRPYPFQPKPFPPPPPQPPPSSSSSVGKLPAKVYVGHSVYKAKAVLTVSPRPGSLKKESLLIYETRGSKFLVFVSEYSFVEL 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04134 132 MobiDBLite consensus disorder prediction 55 73 - -
Trre7g04134 132 MobiDBLite consensus disorder prediction 54 78 - -
Trre7g04134 132 Gene3D Transcriptional Coactivator Pc4; Chain A 76 128 IPR009044 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04134 Trre-Chr7 49568823 49569471 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g04134 42 101 Whirly Transcription Factor Family AT1G14410 41.667 1.71e-08 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04134 K26559 - mnt:112091579 53.9138