Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04130 ATGTCGTCGGCGAATATGAAGGGTTATTACAAACAACAGAAGAAAACCCCCGCAACCACCACCACCACCACCACCAAATCCAAGAAACCTCCGATTCACACTTCCAATCTCCCCCAACCACCATCCACCGTCGCATCCCGCAACACCAATCAAGATGAACAAAACGAAAACGAGAAGATGCTGCAACAATTCGACATGGATATGAAGTATGGACCTTGTATTGGGATGAATAGGATGGAACGCTGGGAACGAGCAGTGAAATTTGGTATGAATCCTCCTGAAGAAATTGGGAAACTCTTGAAGAATGGTAAAGTTCAGCAAGAATCTTTGTGGGATACTCGTATTTAG 348 0.4483 MSSANMKGYYKQQKKTPATTTTTTTKSKKPPIHTSNLPQPPSTVASRNTNQDEQNENEKMLQQFDMDMKYGPCIGMNRMERWERAVKFGMNPPEEIGKLLKNGKVQQESLWDTRI 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04130 115 MobiDBLite consensus disorder prediction 1 58 - -
Trre7g04130 115 Pfam DNA polymerase delta, subunit 4 44 107 IPR007218 GO:0000731|GO:0006260
Trre7g04130 115 PANTHER DNA POLYMERASE DELTA SUBUNIT 4 1 113 IPR007218 GO:0000731|GO:0006260
Trre7g04130 115 MobiDBLite consensus disorder prediction 1 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04130 Trre-Chr7 49521587 49522028 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g04130 2 115 Core DNA Replication Machinery Family AT1G09815 46.721 1.80e-34 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04130 K03505 - sly:101255630 117.472