Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04129 ATGGCTACTACAGTTTCACCAACTTGCTTCATCTTTATTCCTATGATGATAATTTTATCATCATTATGTCCCATAACAACAGTATGTGCAACAGTCCTAGAAGACCTTAAAAACTTACACAAACCACCAGATTTCAACACTACAATTTTCAACAACTGTCTCAAAAACCCATCTCTAAGATACTGCAATTCATCTCCTATGATAGACCTTGATGAAATATTCAAACACACTATTGTTGCTAGCCATCTTTGCAATGAATCTAACAACCCAAATTGTGTTGAATCGTTCCCGAAAATCGATCTTCGAAACCGACCAAACATTGCATCTCTTTACTTGTCTTTCACTTTCTTTTGGAAATATTGTCCATTGAGTATTCTATCTATTGATTTCTCTAACAATTCTGTGAAGGGTAGTTTTCCAAATGATGTTCTTTATTGCACTCAAATTCAGTCTCTTGATTTAAGTCTCAATGAATTTTCTGGTGAAATTCCTATTGAAAGTTTCTCTCCATTAACTAACCTTACTTTTCTTAACCTCTCTTATAACTGTTTTTCTGAGAGTGAAACTTCTGATTCACAATTCTTCAAAAAGTTTAACTCTTCTAGTTTTCTTCATTCTGGTGCTCTCATTGATCATAATAAGTTTACTATAAAAGCTATCATTTTATTGGTTGGTTTTCCTATTCTTGTTATTTTGATGGTAATTTTCTTGGCATGGCTTTGTTTTCAAAGACCTGATTTTCTTCCAAGAATATTTCATAGTAGAAGGTTTGCATTTACACCGGCGATTCTAAAGGCGGCAACTTACGGTTTTTCGAAGGAAAAATTGGTTGGTAAGAGTGATATTGTTCAAATCTATAAAGGGGTGTTAAGAGATGGAACTAAAGTGAAAATTGAGATGTATTGGGATGATATATCAAGGGATAGTTATCATAAATTTGTTGAGGAATGTAAGATTCTGTCTGAGTTAAACCACAAGAATCTTGTTAAGGTTTTAGGGTGGTGTAAAGGTAGAAAATTCAGGGCTATTATAACAGAATGGAGAAAAGATGAAAATGTTGAAATGTGGTTATCAAGGGAAGCACCATCATGGAATCATAGAGTGAAAGTTTTGATGGGAATTGTTGATTGTATGGTATATCTGCATGAGGAATGGCCTGAAGTTGATTATGATCTCAAGACAAGTAGTGTTTTGTTATCTGATAATCTTGTACCATTGATTTCAAGGTTTCAAGTTGGAGACAGAAACAACAGTAGAAAAAAGATATGCAAGTTTGGAGTATTTTTGCTAGAGATGATACTAAACAAGAGGATTCAAGAGGAATTTGATGGAAATGATGCTGGATTTATTAGCTACATGAGAACCCTTCATCATGCAGAATTACAACAGATGATTGATGAGAGAATGGATTTAAATGAAACAACTTTGCATCAAGTTAAACAAGCTTTATCCCTTGGATTAATGTGCATAGACCAATCAAACAATGAGTATCCAAGTTTGGCACATATATTCAATGTTGTATCAAAGGCACACAAGGCTAATCTTGTTTTGACATCTTCAAATCATAAAACATTTCACGGAGATAAAGTTAAGGGACATAAGCGAGTTCAGTTCAGATAA 1620 0.3364 MATTVSPTCFIFIPMMIILSSLCPITTVCATVLEDLKNLHKPPDFNTTIFNNCLKNPSLRYCNSSPMIDLDEIFKHTIVASHLCNESNNPNCVESFPKIDLRNRPNIASLYLSFTFFWKYCPLSILSIDFSNNSVKGSFPNDVLYCTQIQSLDLSLNEFSGEIPIESFSPLTNLTFLNLSYNCFSESETSDSQFFKKFNSSSFLHSGALIDHNKFTIKAIILLVGFPILVILMVIFLAWLCFQRPDFLPRIFHSRRFAFTPAILKAATYGFSKEKLVGKSDIVQIYKGVLRDGTKVKIEMYWDDISRDSYHKFVEECKILSELNHKNLVKVLGWCKGRKFRAIITEWRKDENVEMWLSREAPSWNHRVKVLMGIVDCMVYLHEEWPEVDYDLKTSSVLLSDNLVPLISRFQVGDRNNSRKKICKFGVFLLEMILNKRIQEEFDGNDAGFISYMRTLHHAELQQMIDERMDLNETTLHQVKQALSLGLMCIDQSNNEYPSLAHIFNVVSKAHKANLVLTSSNHKTFHGDKVKGHKRVQFR 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04129 539 ProSiteProfiles Protein kinase domain profile. 271 539 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g04129 539 SUPERFAMILY Protein kinase-like (PK-like) 252 507 IPR011009 -
Trre7g04129 539 Gene3D Transferase(Phosphotransferase) domain 1 357 535 - -
Trre7g04129 539 Pfam Protein tyrosine and serine/threonine kinase 274 412 IPR001245 GO:0004672|GO:0006468
Trre7g04129 539 Gene3D Phosphorylase Kinase; domain 1 253 347 - -
Trre7g04129 539 Gene3D Ribonuclease Inhibitor 45 216 IPR032675 -
Trre7g04129 539 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 105 197 - -
Trre7g04129 539 SUPERFAMILY L domain-like 73 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04129 Trre-Chr7 49518596 49520623 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g04129 127 507 Receptor kinase-like Gene Family AT5G45780 22.940 1.13e-26 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Trre7g04129 PK_Tyr_Ser-Thr 1.2e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04129 - - gmx:100779045 813.913
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g04129 7 49518596 49520623 Trre7g04129 7 49518596 49520623 ECH