Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04118 ATGGGGAGAGAAGAAGAAGAATCCAAAAAGATGGAAATTAATCTCTCTTTGAAGATAGATAGTGATGATGATGAACAAGGAGAAGAAGTAGAAAAAATAGAAGATCATGATCAAGTGAAAGAGGATGAGAATAAGGAAGAAGTTCATGAAGCTACAGCTGGTGAAATTGAAGATGATTCATCAGTGATTCAACCATCTTTGCAAGATAACTCAAAAACAAAAGAGTTAAGTGCCTTAGAAATGGAGATGGAGAGTATGAAAGAAGAAAACAAAGTTTTAAGGAAAGTGGTGGAACAAACAATGAAAGATTACTATGATCTACAAACCAAATTTTCAGTCATCCAAGAAAATAATATTAAAAGAAAGGATCATACACTTTCTCTCTCACTACAAGACAATAATGCATCAACAAGTGGTGAAGGACCTTCAAGATTAATTCATGAGATCTTTACTAAGAATATTGAAATAAGAACTCCTTCTCCATTACCACAAAACAATATTGATCATGATAGTATAAGTGAGAGTGATTTGGGTTTATCACTAAGGTTGCAAACAAGCACAAGTCAGAAAGATATTGAAGAAAATAAAGAAGCTGGCAAAAGAGAACAATTGGCAAGTTTTGAAACAGTGCAGAATAAATTTCAGAGAGTACAACATGACTTGCCAGCTGGTATTACTACTCATGCAGCTGCTTATTCCCCTCCTAATAGAAAGGCTAGGGTTTCTGTTAGAGCAAGATGTGAAACTGCCACAATGAATGATGGATGCCAATGGAGAAAATATGGACAAAAAATTGCAAAAGGAAATCCATGCCCTCGAGCTTATTATCGCTGCACCGTAGCTACAGGTTGTCCTGTTAGAAAACAGGTGCAAAGATGTATAGATGACATGTCTATACTAATTACAACGTATGAAGGAACACATAACCATCCACTACCTGTTGGTGCAACTGCTATGGCATCAACAGCATCAGCAGCAACTTCATTTATGTTACTAGATTCAAGCAACCCTAATTCAGATTATGGTTACACAACCCAACAAACCTTTAACAATCCTTACATTAATAATACCTTCCACCACCCATTAAACCAATCTTCAAATATTAGAAACATAAACCCTAATGATCCATCACAAGGGATTGTTCTTGACCTCACCAATAACAATAATCTCCACGAACCGCGACGTTTTTCAACCGCCGGTAGCTCTAGCTCCACATCAACCGATCAACATCGTTTTTCTTGGATGCAAAACAAATTCAATCAACAAAGTAGTACTAGTAGTAGTGCTAATATTGCAATGAACAATTTTTATAAACCATTGGAAATTCATGATAGAAGTTGGAAAGGTGATCAAGAAAGTAATAGTAGCAACAACAATAATGTGTCTGCAATTGCATCAGATCCTAAGTTTAGGCTTGCTGTTGCAGCTGCAATTTCATCACTCATGAATAAGGAAAGCAACAACAATACTACTACTCATGGTAGCAACAATTGA 1494 0.3601 MGREEEESKKMEINLSLKIDSDDDEQGEEVEKIEDHDQVKEDENKEEVHEATAGEIEDDSSVIQPSLQDNSKTKELSALEMEMESMKEENKVLRKVVEQTMKDYYDLQTKFSVIQENNIKRKDHTLSLSLQDNNASTSGEGPSRLIHEIFTKNIEIRTPSPLPQNNIDHDSISESDLGLSLRLQTSTSQKDIEENKEAGKREQLASFETVQNKFQRVQHDLPAGITTHAAAYSPPNRKARVSVRARCETATMNDGCQWRKYGQKIAKGNPCPRAYYRCTVATGCPVRKQVQRCIDDMSILITTYEGTHNHPLPVGATAMASTASAATSFMLLDSSNPNSDYGYTTQQTFNNPYINNTFHHPLNQSSNIRNINPNDPSQGIVLDLTNNNNLHEPRRFSTAGSSSSTSTDQHRFSWMQNKFNQQSSTSSSANIAMNNFYKPLEIHDRSWKGDQESNSSNNNNVSAIASDPKFRLAVAAAISSLMNKESNNNTTTHGSNN 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04118 497 MobiDBLite consensus disorder prediction 1 21 - -
Trre7g04118 497 ProSiteProfiles WRKY domain profile. 247 313 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre7g04118 497 SUPERFAMILY WRKY DNA-binding domain 245 313 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre7g04118 497 MobiDBLite consensus disorder prediction 32 56 - -
Trre7g04118 497 Gene3D WRKY domain 237 314 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre7g04118 497 MobiDBLite consensus disorder prediction 1 59 - -
Trre7g04118 497 FunFam probable WRKY transcription factor 31 237 314 - -
Trre7g04118 497 Coils Coil 69 103 - -
Trre7g04118 497 MobiDBLite consensus disorder prediction 357 384 - -
Trre7g04118 497 Pfam WRKY DNA -binding domain 253 311 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre7g04118 497 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 48 489 IPR044810 GO:0003700
Trre7g04118 497 SMART WRKY_cls 252 312 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04118 Trre-Chr7 49395315 49397900 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g04118 18 379 WRKY Transcription Factor Family AT1G68150 46.361 7.83e-83 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Trre7g04118 WRKY 3.1e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04118 - - gmx:100820209 572.778