Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04110 ATGGCTTCGTCGAAGGTTGTTGCTGTTGTTGTTTCAACAAATCCGGATCTGCCACGCGCCCCTTCTATTTCATCTTCTTCTTTTCTTTTTTCTTCTCATTTTCATCTTCTACCTTCAAAAAACACCACCAACATGGATGAAATTCTCAAAAATATTTACCCTGCTGCAATAGAAGCTGCTTCTGCCAAACAACAACAGTCCACCACCGATAACAACATTGACGATGTCTGGAAGGACATCGTCGCAGGTGGTGGCACAAACCGTCACGATCATCAATATCAATATCAACATCAATATCATCCTTCTTCCGAGGAAGGTTTCTCCACCTATAGTCCAGGTGGTGATGAAGTTACTCTTGAAGATTTCTTGGTGAGAGCTGGTGCTGTTCCTGCTACTGCTCCTTTCTCTCCTCATCAAAATAATTCTTGTTCTTCTGACGCTTCACATTCTCTTCCATTTGCAACTGTTAAACGTAAAGCTGTTGAGGAAAAACTTGAACTGGATAAAGCTACTCTTCAGAAACAGAAAAGAATGATCAAGAATCGTGAGTCCGCCGCTAGGTCCAGAGAGCGCAAACAGGCTTATACTACTGAGCTTGAGAGCCGTGTTAACCGTCTGCAGACAGAGAATCACTTGTTATTAGAAGAACAGGCTGAGAGGGAAAAGCAAAGGCTAAAAAAGCTCAAAGAGATAGTGATTCCAATCACGGAGCAGCGTAGACCAAAACAGAAACTGCGAAGATTAAATTCATTTTAA 756 0.4206 MASSKVVAVVVSTNPDLPRAPSISSSSFLFSSHFHLLPSKNTTNMDEILKNIYPAAIEAASAKQQQSTTDNNIDDVWKDIVAGGGTNRHDHQYQYQHQYHPSSEEGFSTYSPGGDEVTLEDFLVRAGAVPATAPFSPHQNNSCSSDASHSLPFATVKRKAVEEKLELDKATLQKQKRMIKNRESAARSRERKQAYTTELESRVNRLQTENHLLLEEQAEREKQRLKKLKEIVIPITEQRRPKQKLRRLNSF 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04110 251 Coils Coil 196 231 - -
Trre7g04110 251 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 30 237 IPR043452 GO:0003700|GO:0045893
Trre7g04110 251 CDD bZIP_plant_BZIP46 173 219 - -
Trre7g04110 251 Gene3D - 172 233 - -
Trre7g04110 251 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 171 223 IPR004827 GO:0003700|GO:0006355
Trre7g04110 251 MobiDBLite consensus disorder prediction 178 197 - -
Trre7g04110 251 Coils Coil 162 182 - -
Trre7g04110 251 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 176 191 IPR004827 GO:0003700|GO:0006355
Trre7g04110 251 SUPERFAMILY Leucine zipper domain 173 224 IPR046347 GO:0003700|GO:0006355
Trre7g04110 251 SMART brlzneu 169 231 IPR004827 GO:0003700|GO:0006355
Trre7g04110 251 Pfam bZIP transcription factor 170 229 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04110 Trre-Chr7 49310876 49313600 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g04110 53 241 bZIP Transcription Factor Family AT1G03970 36.321 1.93e-26 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Trre7g04110 bZIP_1 1.1e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04110 K14432 - fve:101301305 155.606