Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04104 ATGGTAACAAATGATGGATCAAGCTTAAGTGTTCTTATTGCTTACCGATTTGTCTTTTCTACTGCCTTCACTGTACCACTTGCTCTCTTCTTTGAAAGGAGAAGTGTGCAAAACCTGACAGGAAAGGTGCTATTCCAAGCTTTTCTTTGTGGGTTATTTGGGGGGTCCTTACAGCAAAACCTCTATGTTAAATCTTTGGCCCTGGTATCAGCAACATATACTATAACCATGTTAAACCTCATCCCTGCCATTACCTACATCATGGCTGTTTCTCTTAGAATGGAGAAGCCAAATCTTGGAACACCAGCTGGGAAAGCCAAGTTGATAGGAACATTAAGTGGAATTGGTGGTGCCATGATCCTCACTTTATACAAAGGCAAAAGATTATTTAACTTTTCAATGCACATTGACTTATTGCAACAATATGTGACATCAACACCACATAAATCCCCTGCTGGTTCTCATGTTTGGGGTATCATGCTAGCTTTGGGCACTTCTCTTAGTTTCTCATTATGGTATATAACCCAGTCAAAGATGGCTGCAAATTTTCCTTGGCACTATTCAACTGCGGCATTAACCTCTTTAATGGGTGCAATTCAATCCTTTGTATTTGCTCTTTGTACGGAGAGAGATCGGAGACAATGGAAGGTCGATTGGAATTTGAGGCTTTTAACGGCAGCTTCTGGGGGTATATTGGCATCTGGGGTGTGCTTTGTCCTATTAGCTTGGTGTGTCCGCATGAAAGGACCCTTATATGTATCTGCTTTTAATCCTCTATTGCTTGTGCTTGTTGCCTTCATTGCATCATTGGTACTGGATGAGTACATTACAGTTGGAAGTCTAACAGGAGCCACATTGATTGTGTGTGGATTGTACATGTTATTATGGGGTAAAAGCAAAGAAGCAAGACAAGTGAATAATAATAATAATATGAATGAAATAGTGTCTGTAAAAGACACTGATAAATGTGATTCAATTAACATTCCCAACTCATCTTTAACTTGCATCCAAAAGGATCATGACAAGGATACTTTAGGCTAA 1041 0.3958 MVTNDGSSLSVLIAYRFVFSTAFTVPLALFFERRSVQNLTGKVLFQAFLCGLFGGSLQQNLYVKSLALVSATYTITMLNLIPAITYIMAVSLRMEKPNLGTPAGKAKLIGTLSGIGGAMILTLYKGKRLFNFSMHIDLLQQYVTSTPHKSPAGSHVWGIMLALGTSLSFSLWYITQSKMAANFPWHYSTAALTSLMGAIQSFVFALCTERDRRQWKVDWNLRLLTAASGGILASGVCFVLLAWCVRMKGPLYVSAFNPLLLVLVAFIASLVLDEYITVGSLTGATLIVCGLYMLLWGKSKEARQVNNNNNMNEIVSVKDTDKCDSINIPNSSLTCIQKDHDKDTLG 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04104 346 SUPERFAMILY Multidrug resistance efflux transporter EmrE 15 126 - -
Trre7g04104 346 PANTHER WAT1-RELATED PROTEIN 2 307 IPR030184 GO:0016020|GO:0022857
Trre7g04104 346 Pfam EamA-like transporter family 12 104 IPR000620 GO:0016020
Trre7g04104 346 Pfam EamA-like transporter family 157 295 IPR000620 GO:0016020
Trre7g04104 346 SUPERFAMILY Multidrug resistance efflux transporter EmrE 214 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04104 Trre-Chr7 49259846 49263162 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g04104 4 332 Nodulin-like Gene Family AT1G68170 37.690 3.41e-72 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04104 - - psat:127105848 574.318