Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04103 ATGGTTAAATTATTCAGTGTTGAAACCATAGAAAATGCAAAGCCTATTGTATTGATGATAGTGGTCCAATCTATATATGCAGTGGTGAATATCATGTTAAAGATGGTAACAAATGATGGATCAAGCTTAAGTGTTCTTATTGCTTACCGATTTGTCTTTTCTACTGCCTTCACTGTACCACTTGCTCTCTTCTTTGAAAGGAGAAGTGTGCAAAACCTGACAGGAAAGGTGCTATTCCAAGCTTTTCTTTGTGGGTTATTTGGGGGGTCCTTACAGCAAAACCTCTATGTTAAATCTTTGGCCCTGGTATCAGCAACATATACTATAACCATGTTAAACCTCATCCCTGCCATTACCTACATCATGGCTGTTTCTCTTAGAATGGAGAAGCCAAATCTTGGAACACCAGCTGGGAAAGCCAAGTTGATAGGAACATTAAGTGGAATTGGTGGTGCCATGATCCTCACTTTATACAAAGGCAAAAGATTATTTAACTTTTCAATGCACATTGACTTATTGCAACAATATGTGACATCAACACCACATAAATCCCCTGCTGGTTCTCATGTTTGGGGTATCATGCTAGCTTTGGGCACTTCTCTTAGTTTCTCATTATGGTATATAACCCAGTCAAAGATGGCTGCAAATTTTCCTTGGCACTATTCAACTGCGGCATTAACCTCTTTAATGGGTGCAATTCAATCCTTTGTATTTGCTCTTTGTACGGAGAGAGATCGGAGACAATGGAAGGTCGATTGGAATTTGAGGCTTTTAACGGCAGCTTCTGGGGGTATATTGGCATCTGGGGTGTGCTTTGTCCTATTAGCTTGGTGTGTCCGCATGAAAGGACCCTTATATGTATCTGCTTTTAATCCTCTATTGCTTGTGCTTGTTGCCTTCATTGCATCATTGGTACTGGATGAGTACATTACAGTTGGAAGTCTAACAGGAGCCACATTGATTGTGTGTGGATTGTACATGTTATTATGGGGTAAAAGCAAAGAAGCAAGACAAGTGAATAATAATAATAATATGAATGAAATAGTGTCTGTAAAAGACACTGATAAATGTGATTCAATTAACATTCCCAACTCATCTTTAACTTGCATCCAAAAGGATCATGACAAGGATACTTTAGGCTAA 1143 0.3885 MVKLFSVETIENAKPIVLMIVVQSIYAVVNIMLKMVTNDGSSLSVLIAYRFVFSTAFTVPLALFFERRSVQNLTGKVLFQAFLCGLFGGSLQQNLYVKSLALVSATYTITMLNLIPAITYIMAVSLRMEKPNLGTPAGKAKLIGTLSGIGGAMILTLYKGKRLFNFSMHIDLLQQYVTSTPHKSPAGSHVWGIMLALGTSLSFSLWYITQSKMAANFPWHYSTAALTSLMGAIQSFVFALCTERDRRQWKVDWNLRLLTAASGGILASGVCFVLLAWCVRMKGPLYVSAFNPLLLVLVAFIASLVLDEYITVGSLTGATLIVCGLYMLLWGKSKEARQVNNNNNMNEIVSVKDTDKCDSINIPNSSLTCIQKDHDKDTLG 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04103 380 PANTHER WAT1-RELATED PROTEIN 14 341 IPR030184 GO:0016020|GO:0022857
Trre7g04103 380 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 160 - -
Trre7g04103 380 SUPERFAMILY Multidrug resistance efflux transporter EmrE 248 334 - -
Trre7g04103 380 Pfam EamA-like transporter family 191 329 IPR000620 GO:0016020
Trre7g04103 380 Pfam EamA-like transporter family 14 138 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04103 Trre-Chr7 49259744 49263162 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g04103 14 361 Nodulin-like Gene Family AT1G25270 36.134 1.78e-77 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04103 - - psat:127105848 628.246