Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04102 ATGATTTTAAGTTCAACTCTAAATTCTATTCTAAATTGTTGCTTAAGTTGGCGGTCATCCCTAACTTGTTTGAGGAAATTGTACCCTCAGGAGTCAGGATTAGTGATTATTGTTATTGCTTGGTGGATAAGGATGAGAGGTCCTTTATTTGCAGCCGTTTTCAATCCTCTTCAACTTTTACTTGTAGCAATCTTTGCCTATTTATTGGTGGATGAGAAGTTATATTTAGGAAGTGTCCTTGGAGCAGTGTTGCTCGTGTGTGGTCTATATATAGTGCTTTGGAATTGGAGTAAAAGCAAAGAAATGGAAAAAAAGACACAATTATCATTAAAAACTAACATTGAGCTTGAAGGAGAAGAGCTTGTTATGTCCAATCCTGAAAAGTGTATCCAAAGCAACAAGACTCAAATCAATAATAATATTCAGATTAATGTTACCAATGATCAATGA 450 0.3467 MILSSTLNSILNCCLSWRSSLTCLRKLYPQESGLVIIVIAWWIRMRGPLFAAVFNPLQLLLVAIFAYLLVDEKLYLGSVLGAVLLVCGLYIVLWNWSKSKEMEKKTQLSLKTNIELEGEELVMSNPEKCIQSNKTQINNNIQINVTNDQ 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04102 149 PANTHER WAT1-RELATED PROTEIN 17 106 IPR030184 GO:0016020|GO:0022857
Trre7g04102 149 SUPERFAMILY Multidrug resistance efflux transporter EmrE 34 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04102 Trre-Chr7 49254208 49255095 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g04102 32 104 Nodulin-like Gene Family AT1G68170 52.055 2.79e-18 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04102 - - cam:101488446 125.946