Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04101 ATGTTGAAGATGAAGGGCATATACAATTCATTGGAAGGACTAAAACCAATAGTACTAATGGTGTTTGTGCAGATTGTATATGCTGCTGTGAATATCATATGCAAGCTCGTTATAAATGATGGAATGAGCATGAGGGTGGCTACCGCTTACCACCTCACTTTTGCGTCGGCTTTCACCATTCCCCTTGCTCTTATCTTTGATAGGAAATTGTACCCTCAGGAGTCAGGATTAGTGATTATTGTTATTGCTTGGTGGATAAGGATGAGAGGTCCTTTATTTGCAGCCGTTTTCAATCCTCTTCAACTTTTACTTGTAGCAATCTTTGCCTATTTATTGGTGGATGAGAAGTTATATTTAGGAAGTGTCCTTGGAGCAGTGTTGCTCGTGTGTGGTCTATATATAGTGCTTTGGAATTGGAGTAAAAGCAAAGAAATGGAAAAAAAGACACAATTATCATTAAAAACTAACATTGAGCTTGAAGGAGAAGAGCTTGTTATGTCCAATCCTGAAAAGTGTATCCAAAGCAACAAGACTCAAATCAATAATAATATTCAGATTAATGTTACCAATGATCAATGA 579 0.3713 MLKMKGIYNSLEGLKPIVLMVFVQIVYAAVNIICKLVINDGMSMRVATAYHLTFASAFTIPLALIFDRKLYPQESGLVIIVIAWWIRMRGPLFAAVFNPLQLLLVAIFAYLLVDEKLYLGSVLGAVLLVCGLYIVLWNWSKSKEMEKKTQLSLKTNIELEGEELVMSNPEKCIQSNKTQINNNIQINVTNDQ 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04101 192 PANTHER WAT1-RELATED PROTEIN 75 149 IPR030184 GO:0016020|GO:0022857
Trre7g04101 192 Pfam EamA-like transporter family 15 136 IPR000620 GO:0016020
Trre7g04101 192 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04101 Trre-Chr7 49253248 49255095 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g04101 75 168 Nodulin-like Gene Family AT1G68170 42.553 5.42e-18 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04101 - - cam:101488446 125.946