Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04100 ATGAGTATGAGGGTAGCTGCCGCTTACCGCCTCTCTTTTGCAGCGGCTTTCACTATTCCCCTTGCTCTTATCTTTGATAGGAAGAAGAGACCAAAGCTTACATGGAAGGTTCTCTATATGACATTTCTTTGTGGATTATTTGGGGGAAGTTTGCTTCTAAACCTTTATGGCGTGGGACTGACTTTAACTTCAGCAACATTTATGTTGTCGATGCTCAACCTTGTTCCAGGAGTTACCTTCATCATGGCCATATCCTTCGGATTGGAAAAGCTAAATTGGGGATTAGCAGAGGGAAAGGCCAAGATAATAGGAACATTAATTAGCATTAGTGGGGCAATGCTGATGATATTTTACAAAGGAGTAGAAATTGATATTTGGAAATCTAATATAAACCTTATGCATCAACGTCATAATCAAAATGGGCTTATGGAACCACTACATGCTGATTTTAGTAATAAACTATTGGGAATTCCATGTGCTATAGGAAGTTGTTGCTCTTTTTCTCTGTGGTTAATTATCCAGACTAAGTTGAATGAAGAATATCCATGCCATCATTCAAGCTCAGCTTTGATGTCCACCATGGGAGCAATTCAAGCCATTGTCTTGGCTCTTTGTGTTGATAGAGAATGGGCGCAATGGAAGCTTGGTTATGATATCAGACTTCTCACTATTGTTTATTCGGGAATTGTAGGTTCTGGAATAGTGATTGTTGCCATTGCTTGGTGCATAAAAATGAGAGGTCCTATATTTGCATCTATTTTCAATCCTCTTCAGCTTTTACTTGTGGCTATCTCTGCCTATTTGTTATTGAATGAGAAGTTATATTTAGGAAGTGTCTTTGGAGCAGTGTTAATCGTATGCGGCATATATGCAGTGCTTTGGAGCAAGAGCAAAGAAATGAAAAAGAAGACTAAGTTATTATCATTAGAGATTGACATTAAGTCTGAAGCAGTGGTAGAGATCGTTATGTCGAAACCTCACAAGTGA 987 0.387 MSMRVAAAYRLSFAAAFTIPLALIFDRKKRPKLTWKVLYMTFLCGLFGGSLLLNLYGVGLTLTSATFMLSMLNLVPGVTFIMAISFGLEKLNWGLAEGKAKIIGTLISISGAMLMIFYKGVEIDIWKSNINLMHQRHNQNGLMEPLHADFSNKLLGIPCAIGSCCSFSLWLIIQTKLNEEYPCHHSSSALMSTMGAIQAIVLALCVDREWAQWKLGYDIRLLTIVYSGIVGSGIVIVAIAWCIKMRGPIFASIFNPLQLLLVAISAYLLLNEKLYLGSVFGAVLIVCGIYAVLWSKSKEMKKKTKLLSLEIDIKSEAVVEIVMSKPHK 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04100 328 SUPERFAMILY Multidrug resistance efflux transporter EmrE 9 118 - -
Trre7g04100 328 PANTHER WAT1-RELATED PROTEIN 1 303 IPR030184 GO:0016020|GO:0022857
Trre7g04100 328 Pfam EamA-like transporter family 155 293 IPR000620 GO:0016020
Trre7g04100 328 Pfam EamA-like transporter family 6 116 IPR000620 GO:0016020
Trre7g04100 328 SUPERFAMILY Multidrug resistance efflux transporter EmrE 210 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04100 Trre-Chr7 49247358 49251975 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g04100 2 304 Nodulin-like Gene Family AT1G25270 41.254 4.41e-85 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04100 - - mtr:25493310 489.189