Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04097 ATGGGAAGTATGTGGGATAGGTTGAAGCCAGCCTTGCTAATGATTGGGGTGCAAATAGTATTTTCTGCTTGCAATATTCTTTACAAGTTTGCCATATTTGATGGAATGAGTACTATTGTCATTGCAGCTTATCGTTTAGCCTTTGCAACGGTTACCACTATTCCTCTTGCTCTTATTTTTGAAAGGTATCTTGGTTGGGATGTTAGGCTCTTCACGGTCGCTTTTTCGGGTATTATGGCGTCTGGAGTAATGGTTCTTGTCCTGGCATGGGTCGTACAGACGAAAGGGCCTTTATACGCGTCCACTTTCAACCCTCTAATGCTTTTGTTTGTAGCTTTTGTCGCATCTATGCTTCTGGATGAGAAGTTAAACTTAGGAAGTATACTCGGAGGAGCGTTGATTGTGTGTGGCCTATACACGGTACTATGGGGTAAAAGTAGAGAAATACAAAAGAAGATTGAATTAGAGCCAACAGAAATTATTGGTGATTCCGAAGCTACAAGACCATTGTTGAGTCCATGA 522 0.4157 MGSMWDRLKPALLMIGVQIVFSACNILYKFAIFDGMSTIVIAAYRLAFATVTTIPLALIFERYLGWDVRLFTVAFSGIMASGVMVLVLAWVVQTKGPLYASTFNPLMLLFVAFVASMLLDEKLNLGSILGGALIVCGLYTVLWGKSREIQKKIELEPTEIIGDSEATRPLLSP 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04097 173 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
Trre7g04097 173 Pfam EamA-like transporter family 9 142 IPR000620 GO:0016020
Trre7g04097 173 PANTHER WAT1-RELATED PROTEIN 63 149 IPR030184 GO:0016020|GO:0022857
Trre7g04097 173 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04097 Trre-Chr7 49239326 49242078 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g04097 3 62 Nodulin-like Gene Family AT1G68170 45.000 3.07e-10 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04097 - - mtr:25493309 189.504