Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04096 ATGGGAAGTATGTGGGATAGGTTGAAGCCAGCCTTGCTAATGATTGGGGTGCAAATAGTATTTTCTGCTTGCAATATTCTTTACAAGTTTGCCATATTTGATGGAATGAGTACTATTGTCATTGCAGCTTATCGTTTAGCCTTTGCAACGGTTACCACTATTCCTCTTGCTCTTATTTTTGAAAGGAAGTGGTATTTTAATTGTTGTATAACCGTTTTGAATGAATGGAAGCTTGGTTGGGATGTTAGGCTCTTCACGGTCGCTTTTTCGGGTATTATGGCGTCTGGAGTAATGGTTCTTGTCCTGGCATGGGTCGTACAGACGAAAGGGCCTTTATACGCGTCCACTTTCAACCCTCTAATGCTTTTGTTTGTAGCTTTTGTCGCATCTATGCTTCTGGATGAGAAGTTAAACTTAGGAAGTATACTCGGAGGAGCGTTGATTGTGTGTGGCCTATACACGGTACTATGGGGTAAAAGTAGAGAAATACAAAAGAAGATTGAATTAGAGCCAACAGAAATTATTGGTGATTCCGAAGCTACAAGACCATTGTTGAGTCCATGA 564 0.4078 MGSMWDRLKPALLMIGVQIVFSACNILYKFAIFDGMSTIVIAAYRLAFATVTTIPLALIFERKWYFNCCITVLNEWKLGWDVRLFTVAFSGIMASGVMVLVLAWVVQTKGPLYASTFNPLMLLFVAFVASMLLDEKLNLGSILGGALIVCGLYTVLWGKSREIQKKIELEPTEIIGDSEATRPLLSP 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04096 187 PANTHER WAT1-RELATED PROTEIN 74 163 IPR030184 GO:0016020|GO:0022857
Trre7g04096 187 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
Trre7g04096 187 Pfam EamA-like transporter family 9 156 IPR000620 GO:0016020
Trre7g04096 187 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04096 Trre-Chr7 49239326 49242078 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g04096 3 63 Nodulin-like Gene Family AT1G68170 45.902 9.05e-11 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04096 - - mtr:25493309 199.904