Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04094 ATGGTTGTTGGTGCAATTTGTGATTCTGAGTCACTAAACCATGCAGTCACAATTCCAAATGCTACAAAGGAAATGGAAGAAAAACAAATTCAAATCACAAAAGAAAATAATAACAATAGCAATATTGATTATTGGCAAAGAGCTCAATGGCTTCGCGCCGCCGTATTAGGAGCAAATGATGGATTAGTTTCTGTTGCTTCACTAATGATGGGAGTAGGAGCTGTTAAAACCGATAGCACGGCAATGTTAGTCGCGGGTTTTGCAGGATTAGTCGCGGGAGCATGTGGTATGGCAATAGGAGAATTTGTTTCTGTTTTCACTCAATATGAAGTTGAAGTTGGTCAAATGATGAGAGATATAGGAACAAGTGATAGAAAAGAAAAGGAATTGGAAATTGAGTTGGAGAAAAGGAAATCATTGCCTAATCCATTACAAGCTGCTTTAGCTTCTGCATTCTCATTTTCTATAGGTGGTTTGGTTCCTTTACTCAGTGGTTCATTTATAAGTGATTATAAGATAAGGCTTATTGTGATTGTTTCAATAGCTAGTTTGGCTTTGGTTGTTTTTGGAAGAGTTGGTGCTATGCTTGGTAAGACACCAAAAATGAAATCTTCTATTAGGTTTCTTTTTGGTGGATGGATGGCTATGGCAATCACTTTTGGGTTAACCAAATTACTTGCACATTCTAGTGGTTTGGATTTATGA 705 0.3716 MVVGAICDSESLNHAVTIPNATKEMEEKQIQITKENNNNSNIDYWQRAQWLRAAVLGANDGLVSVASLMMGVGAVKTDSTAMLVAGFAGLVAGACGMAIGEFVSVFTQYEVEVGQMMRDIGTSDRKEKELEIELEKRKSLPNPLQAALASAFSFSIGGLVPLLSGSFISDYKIRLIVIVSIASLALVVFGRVGAMLGKTPKMKSSIRFLFGGWMAMAITFGLTKLLAHSSGLDL 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04094 234 Pfam VIT family 124 223 IPR008217 GO:0005384|GO:0030026
Trre7g04094 234 Pfam VIT family 51 116 IPR008217 GO:0005384|GO:0030026
Trre7g04094 234 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 25 227 IPR008217 GO:0005384|GO:0030026
Trre7g04094 234 Coils Coil 18 38 - -
Trre7g04094 234 CDD Nodulin-21 49 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04094 Trre-Chr7 49164513 49165217 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g04094 24 232 Nodulin-like Gene Family AT3G43660 56.459 7.58e-80 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04094 K22736 - gmx:100810586 271.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g04094 7 49164513 49165217 Trre7g04094 7 49164513 49165217 ECH