Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04092 ATGACCTCTCAAATTGGAGCAAAAACTAATGGAATTTCACCAAACAGTTTTCAAATTGAGATTCCTATCCATGCCAATAGTACTACTACTATAGTAGATAAAAAACAGAACCAAAGTATTGATGAAAATGAGAGTAATAACATTGATTACTCTCAAAGAGCACAATGGCTTAGAGCAGCCATGTTAGGTGCCAATGATGGATTAATCACTGTTGCTTCATTGATGATCGGTATTGGAGCTATAAAAGAAGATATTAGTGTAATGCTTCTTGCTGGTTTCGTCGGTTTAGTAGCCGGTGCTTGTAGCATGGCAATTGGTGAGTTTGTTTCTGTTTATACTCAATATGACATTGAGATTGCCCAAATTAAAAGAGAAAGAGAAATAGCAAATAATAATGATGATGAAGAAAGTAGTGAAAGAGAGAAATTGCCAAATCCATTTCAAGCAGCATTAGCATCAGCACTTGCATTTTCTGTTGGTGCTCTAATGCCATTGCTAGCAGCTGCATTTATAAAGAATCATAAGATTAGAATGGGTGTTGTTGCTGCTGTGGTTAGTTTTGCATTGTTGGTGTTTGGATCAGTGGGAGCATTGATTGGAAAAACTCCAATTATGAGGTCTTGTGTTAGAGTTCTTATTGGTGGTTGGATGGCTATGGCTATTACTTTTGGTGTCACCAAATTGATTGGCACTACTGGAATTTGA 705 0.3674 MTSQIGAKTNGISPNSFQIEIPIHANSTTTIVDKKQNQSIDENESNNIDYSQRAQWLRAAMLGANDGLITVASLMIGIGAIKEDISVMLLAGFVGLVAGACSMAIGEFVSVYTQYDIEIAQIKREREIANNNDDEESSEREKLPNPFQAALASALAFSVGALMPLLAAAFIKNHKIRMGVVAAVVSFALLVFGSVGALIGKTPIMRSCVRVLIGGWMAMAITFGVTKLIGTTGI 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04092 234 CDD Nodulin-21 55 203 - -
Trre7g04092 234 Coils Coil 112 132 - -
Trre7g04092 234 Pfam VIT family 57 136 IPR008217 GO:0005384|GO:0030026
Trre7g04092 234 Pfam VIT family 139 226 IPR008217 GO:0005384|GO:0030026
Trre7g04092 234 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 34 229 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04092 Trre-Chr7 49161463 49162167 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g04092 37 234 Nodulin-like Gene Family AT3G43660 61.111 2.11e-91 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04092 K22736 - gmx:100802489 304.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g04092 7 49161463 49162167 Trre7g04092 7 49161463 49162167 ECH