Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04090 ATGTTAAGAGCCAATGATGGATTAATCACTGTTGCTTCATTGATGATTGGTATTGGAGCTATAAAAGAAGATATCAGTGTAATGCTCCTAACTGGTTTCGCCGGTTTAGTAGCCGGTGGTTGTAGCATGGCAATTGGTGAGTTTGTTTCTGTTTATACTCAATATGACATTGAGATAGCTCAAATGAAAAGAAAAGGAGAAATAAGAAATAATAATAATGATGAAGAGAGTAATGAAAAGGAGAAATTACCAAATCCATTTCAAGCAGCATTAGCATCAGCACTTGCATTTTCTGTTGGTGCTGTTATGCCATTGCTAGCAGCTGCATTTATAAAGAATCATAAGGTTAGAATGGGTTTTGTTGCTGTTGTGGTGAGTTTTGCATTGTTGGTACTTGGTGTTTGGATCAGTGGGAGGATTGATTGGAAAAACTCCAGTTATGAGGTCTTGTGTTAG 456 0.3706 MLRANDGLITVASLMIGIGAIKEDISVMLLTGFAGLVAGGCSMAIGEFVSVYTQYDIEIAQMKRKGEIRNNNNDEESNEKEKLPNPFQAALASALAFSVGAVMPLLAAAFIKNHKVRMGFVAVVVSFALLVLGVWISGRIDWKNSSYEVLC 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04090 151 Pfam VIT family 79 136 IPR008217 GO:0005384|GO:0030026
Trre7g04090 151 Pfam VIT family 4 76 IPR008217 GO:0005384|GO:0030026
Trre7g04090 151 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 2 134 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04090 Trre-Chr7 49155799 49156254 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g04090 1 136 Nodulin-like Gene Family AT3G43660 61.594 1.16e-55 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04090 K22736 - gmx:100790996 182.185
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g04090 7 49155799 49156254 Trre7g04090 7 49155799 49156254 ECH