Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04083 ATGGTAACAGAAATCTCTCCTACGGCACAAGATGATAGCCTGCAAATCCCACCTTTCAATGCTGCATCTCTTTTGGATCCAAGGCGATTGCCGTCCCAGAAACATAAAAGGATGAGAGAAACTGAAGACAACCTTCTTGGAGTAGGCTCTCTTGGGCCTGTTTACAGAGCAGAGTTACCAGATAACAAAGTTTTGGCTGTGAAGAACATCCAAATGGCAGGGTTATCTTTCAATGAAGAGGAAAAGTTCTTAGACGTGGTCTGTACCGTTTCCCGTCTGAAGCACCCCAACATTGTTGCACTTAAAGGTTACTGTTTGGAGCACGGACAACATCTTGTCTACGACCATGTCAGAAATTTAACTCTAGACGATGCTCTACACAGTGCATCATACAAACCTTTATCTTGGGGACTCCGTCTACGAATCGCTATAGGTGTTGCACAAGCTCTAGATTATCTGCACTCCACGTTCTCCCCTCCTGTCACCCATGGCAACTTGAAGGCTGCCAATATTCTACTGGATGAAAATCTGATGCCTCGTGTTTCTGACTGTGGCTTGGCTATCTTGAAACCACTGACCAACACGAAAGCCAAAGCTCGGGCTTCTGAGATTGCTATTAGAGATAGTGGGTACGATTCACCTAATCATGGCCAACCTGGAACCAGCAGCACAAAGAGTAACATATTTGCCTTTGGGGTGTTGCTTTTGGAGCTGTTATCAGGAAGAAAACCTTTTGAAAGTTTTATGCCAAAGGAAGAGCAGTATCTAGCCAATTGGGCTTCATCAAGGCTTCATGATAGCGAGATCCAGCAATTAAAAGAACATTCTCATCTAAAGCTCTTTCTTTCTCGTTATGCTGATATAATTTCTCTATGCACTCAGCCGCCTGCAAAGGAATTCAGACCTCCAATGTCTGAAATAGTGGACTCTCTTGTATCTTTTATGCAAAAGCTCAATGTGTCAAAGAGTGTTGGTGGGTTAGCAGATGGAACTGAACTTGACCCACTCGACAGATGTATTCTTAATAATGGTTCTCACTAG 1041 0.4371 MVTEISPTAQDDSLQIPPFNAASLLDPRRLPSQKHKRMRETEDNLLGVGSLGPVYRAELPDNKVLAVKNIQMAGLSFNEEEKFLDVVCTVSRLKHPNIVALKGYCLEHGQHLVYDHVRNLTLDDALHSASYKPLSWGLRLRIAIGVAQALDYLHSTFSPPVTHGNLKAANILLDENLMPRVSDCGLAILKPLTNTKAKARASEIAIRDSGYDSPNHGQPGTSSTKSNIFAFGVLLLELLSGRKPFESFMPKEEQYLANWASSRLHDSEIQQLKEHSHLKLFLSRYADIISLCTQPPAKEFRPPMSEIVDSLVSFMQKLNVSKSVGGLADGTELDPLDRCILNNGSH 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04083 346 FunFam Leucine-rich repeat receptor-like protein kinase 117 322 - -
Trre7g04083 346 ProSiteProfiles Protein kinase domain profile. 40 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g04083 346 Pfam Protein tyrosine and serine/threonine kinase 44 311 IPR001245 GO:0004672|GO:0006468
Trre7g04083 346 PANTHER OS01G0253100 PROTEIN 41 316 - -
Trre7g04083 346 Gene3D Transferase(Phosphotransferase) domain 1 118 326 - -
Trre7g04083 346 Gene3D Phosphorylase Kinase; domain 1 41 116 - -
Trre7g04083 346 SUPERFAMILY Protein kinase-like (PK-like) 41 311 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04083 Trre-Chr7 49064304 49066251 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g04083 41 340 Strubbelig Receptor Gene Family AT5G06820 57.516 4.27e-107 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Trre7g04083 PK_Tyr_Ser-Thr 5.6e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04083 - - tpra:123896060 582.022