Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04071 ATGGCCTCCCAAATTGGAGCAAACACTAATGATGGACTAATCACTGTTGCCTCATTGATGATCGGTATTGGAGCTATAAAAGAAGATATCAGTGTAATGCTCCTTGCTGGTTTCGCCGGTTTAGTAGCCGGTGCTTGTAGCATGGCGATTGGTGAGTTTGTTTCTGTTTATACTCAATATGACATTGAGATAGCTCAAATTAAAAGAGAAAAAGAAATAGCAAATAATAATAATGATGAAGAGAGTAATGAAAAGGAGAAATTGCCAAATCCATTTCAAGCAGCATTAGCATCAGCACTTGCATTTTCTATTGGTGCTCTAATGCCATTGTTAGCAGCTGCATTTATAAAGAATCATAAGATTAGAATGGGTGTTGTTGCTGCTGTGGTGAGTTTTGCATTGTTGGTGTTTGGATCAGTGGGAGCATTGATTGGTAAAACTCCAGTTATGAGGTATTGTGTTAGAGTTCTTATTGGTGGTTGGATGGCTATGGCTATTACTTTTGGTTTCACCAAATTGATTGGCACCACTGGACTTTGA 540 0.3852 MASQIGANTNDGLITVASLMIGIGAIKEDISVMLLAGFAGLVAGACSMAIGEFVSVYTQYDIEIAQIKREKEIANNNNDEESNEKEKLPNPFQAALASALAFSIGALMPLLAAAFIKNHKIRMGVVAAVVSFALLVFGSVGALIGKTPVMRYCVRVLIGGWMAMAITFGFTKLIGTTGL 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04071 179 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 10 174 IPR008217 GO:0005384|GO:0030026
Trre7g04071 179 Coils Coil 57 84 - -
Trre7g04071 179 Pfam VIT family 84 171 IPR008217 GO:0005384|GO:0030026
Trre7g04071 179 Pfam VIT family 10 82 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04071 Trre-Chr7 48909101 48909640 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g04071 10 179 Nodulin-like Gene Family AT3G43660 64.706 2.36e-79 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04071 K22736 - gmx:100790996 251.906