Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04058 ATGGAAGAGGCAAATAAGAAGGGAGATGAAGAAGTTAAGTACCGTGGTGTTAGAAAAAGGCCATGGGGAAAATTTGGGGCAGAGATTAGGGATCCAACAAAACCTTCCGGTAGACAATGGTTAGGGACATTTGACACAGCTGAGGAAGCTGCGAGAGCTTATGATTGTGCTGCCATTCGTTTGCGGGGTGCTCTTGCCATTCTTAATTTTCCTGATGAATATTATTTTCATCTTTCTTCTTTATCGTCGTCGTCGTCATCATCATCTACTTGTGCCATTGCAAGCACTTCTTCTACACAAGATAAGGAAGTTATTGAGTTTGAGTATTTAGATAATAAGGTGTTGGAAGATCTTCTTGCGCCATCGAAAGAAGAGAATGAAAAGAAGAAATAA 393 0.4046 MEEANKKGDEEVKYRGVRKRPWGKFGAEIRDPTKPSGRQWLGTFDTAEEAARAYDCAAIRLRGALAILNFPDEYYFHLSSLSSSSSSSSTCAIASTSSTQDKEVIEFEYLDNKVLEDLLAPSKEENEKKK 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04058 130 Pfam AP2 domain 13 63 IPR001471 GO:0003700|GO:0006355
Trre7g04058 130 Gene3D AP2/ERF domain 12 72 IPR036955 GO:0003700|GO:0006355
Trre7g04058 130 MobiDBLite consensus disorder prediction 81 100 - -
Trre7g04058 130 SMART rav1_2 13 77 IPR001471 GO:0003700|GO:0006355
Trre7g04058 130 FunFam Ethylene-responsive transcription factor 2 13 72 - -
Trre7g04058 130 PRINTS Ethylene responsive element binding protein signature 37 53 IPR001471 GO:0003700|GO:0006355
Trre7g04058 130 PRINTS Ethylene responsive element binding protein signature 14 25 IPR001471 GO:0003700|GO:0006355
Trre7g04058 130 ProSiteProfiles AP2/ERF domain profile. 13 71 IPR001471 GO:0003700|GO:0006355
Trre7g04058 130 CDD AP2 13 72 IPR001471 GO:0003700|GO:0006355
Trre7g04058 130 PANTHER DNA-BINDING DOMAIN 6 125 IPR044808 GO:0003700|GO:0009873
Trre7g04058 130 SUPERFAMILY DNA-binding domain 13 73 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04058 Trre-Chr7 48822567 48822959 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g04058 9 119 AP2-EREBP Transcription Factor Family AT3G23230 60.169 6.33e-41 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Trre7g04058 AP2 1.5e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04058 - - gmx:100807295 159.844