Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03985 ATGCAAGAAGGTGAGAATGTGACTCTTTTGTACATCCATTATGAATTAGAGTTACATGTAATACTATTTATTCACCTGGAGGGAGGAGGATGGTGTAACACTCTCAGAAACTGTGTCTACAGAAAAAAGTCTCCTCGTGGTTCCTCAATATACATGGAAAATCGAATACCATTCACAGGAATATTGAGCAATAAACCCGAAGAAAATGCTGATTTCTTTAACTGGAATAGAGTCAAATTAAGGTACTGTAATGGAGCGTCTTTTAGTGGAGATAGTGCAAACAAGGCTGCGGGGCTTCAATTCCGTGGACAAAGAATATGA 321 0.3863 MQEGENVTLLYIHYELELHVILFIHLEGGGWCNTLRNCVYRKKSPRGSSIYMENRIPFTGILSNKPEENADFFNWNRVKLRYCNGASFSGDSANKAAGLQFRGQRI 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03985 106 Pfam Pectinacetylesterase 23 106 IPR004963 GO:0016787
Trre7g03985 106 PANTHER NOTUM-RELATED 23 106 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03985 Trre-Chr7 48056972 48057692 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g03985 23 106 Carbohydrate Esterase AT3G05910 72.619 5.88e-41 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03985 K19882 - gmx:100811787 153.68