Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03984 ATGGGTAGATTATGGATCATGTATAGATGCAAGAAGGGAGGAGGATGGTGTAACACTCTCAGAAACTGTGTCTACAGAAAAAAGTCTCCTCGTGGTTCCTCAATATACATGGAAAATCGAATACCATTCACAGGAATATTGAGCAATAAACCCGAAGAAAATGCTGATTTCTTTAACTGGAATAGAGTCAAATTAAGGTACTGTAATGGAGCGTCTTTTAGTGGAGATAGTGCAAACAAGGCTGCGGGGCTTCAATTCCGTGGACAAAGAATATGA 276 0.3986 MGRLWIMYRCKKGGGWCNTLRNCVYRKKSPRGSSIYMENRIPFTGILSNKPEENADFFNWNRVKLRYCNGASFSGDSANKAAGLQFRGQRI 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03984 91 PANTHER NOTUM-RELATED 12 91 IPR004963 GO:0016787
Trre7g03984 91 Pfam Pectinacetylesterase 12 91 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03984 Trre-Chr7 48056972 48057718 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g03984 12 91 Carbohydrate Esterase AT3G05910 72.500 2.62e-38 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03984 K19882 - gmx:100811787 146.362