Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03983 ATGTCTCAAGGAATAAAGAATGCAGAACAGGCCCTTCTCTCCGAATGCTCCGCGGGTGGTCTAACATCCATAATACATTGTGATGAGTTCCAGAGCTTGTTACCAAAACCTTCCAAAGTGAAGTGTAATAGTGATGCAGGATTTTTTCTCGATGCAATTGATGTATCTGGAGGACGGTCACTGAGGGATCTGTTTGGAGGCGTTGTTCATTTACAGGAAGTTCACAAAAATCTGCCGAAAAATTTTATAAGCCGACTGGACCCAACTCCGTGCTTCTTTCCTCAAAATTTGGTAGAACATGTGGAGACACCACTGTTTCTACTCAACGCGGCTTATGATGTGTGGCAGGTCCGGTCGAGTTTAGCCCCGACCATAGCTGATCCCCTTGGCACTTGGAATGACTGCAAATCAAACCATGCAGAGTGTAACTCGTCTCAAATTCAGTTCCTCCAAGGTGTTTTTCGATCTTTACTGTTGTGA 480 0.4479 MSQGIKNAEQALLSECSAGGLTSIIHCDEFQSLLPKPSKVKCNSDAGFFLDAIDVSGGRSLRDLFGGVVHLQEVHKNLPKNFISRLDPTPCFFPQNLVEHVETPLFLLNAAYDVWQVRSSLAPTIADPLGTWNDCKSNHAECNSSQIQFLQGVFRSLLL 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03983 159 Pfam Pectinacetylesterase 2 155 IPR004963 GO:0016787
Trre7g03983 159 PANTHER NOTUM-RELATED 1 157 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03983 Trre-Chr7 48055858 48056950 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g03983 1 159 Carbohydrate Esterase AT1G57590 62.893 3.46e-71 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03983 K19882 - gmx:100786972 245.743