Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03965 ATGGACGATAAGATTAATTTCTGGACCTTGTGCCCTTATTGTTACATTTATTATGAGTATCCGAAGAAGTATGAAGAGTGGTTTTCTGGTGATTCCAAAGATGTGAATGGTGCTTCTTCTAATTGGAACCCTATTGCACCTTTATTTCCCTCTTCTGTGAAGGGATCTTCCAATAGAACAGATTCTGATAATGCTGGTGAAAAGGAAGTTGTGGAGAGACCTGGGGGGAGTGCTACTAGTGCTGCAGATGGGAATGAGAATGAAAAGAATGTTGGAGTTGTTGATGCTGCTGGTGTGAAGGGATCTTCCAATATGACATATTATGGTAATGCTGGTGAAAAGGAAGTTGTGGAGAGACCTGGCGGGAGTGCTAATGGTGCTTCAGCTGGGAATGAGAGTGAAAAGAATGTTGGAGCTGTTGATGCTAGTGGTGTGAAGGGATCTTCCAATAGGACAGATTCTGGTAATGCTGGTGAAAAGGAAGCTGTGGAGAGACGTGGGGGCAGTGCTGCAGCTGGGAATGGAAATGAAAAGAATGTTGATGCTGTTGATGTTGTTGGTGTGAAGGGATCTTCCAATAGGACAGATTTTGGTAATGCTGGTGAAAAGGAAGTTGTGGAGAGACTTGGGGAGAGTGCTACTGGTGCTGCACCTGGGAATGGGAATGAAAAGAATGTTGGAGCTGTTGATGCTGCTGGTGTGAAGGCAGATACTAGTAAGAAAGCTGTACAAAGTAGTTCCATGAGGACGGGTGCTGGAAATTTGGATTTGAATGTGGAGTTCAATAATGATATGAAGGAGCCGTCCTGTTTAATGCGTGCTTGTGAAGACGATGCAACTAGCGATGCTGAGGATGATGTTGAGTGGGATGACTTTTTGAAGGGTCTTGATGTTATGATCCGTAACTTACCCTTTCTCAATGTGGAGGAAGATGATAAGGTTAAGGGTCATTAG 954 0.4392 MDDKINFWTLCPYCYIYYEYPKKYEEWFSGDSKDVNGASSNWNPIAPLFPSSVKGSSNRTDSDNAGEKEVVERPGGSATSAADGNENEKNVGVVDAAGVKGSSNMTYYGNAGEKEVVERPGGSANGASAGNESEKNVGAVDASGVKGSSNRTDSGNAGEKEAVERRGGSAAAGNGNEKNVDAVDVVGVKGSSNRTDFGNAGEKEVVERLGESATGAAPGNGNEKNVGAVDAAGVKADTSKKAVQSSSMRTGAGNLDLNVEFNNDMKEPSCLMRACEDDATSDAEDDVEWDDFLKGLDVMIRNLPFLNVEEDDKVKGH 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03965 317 MobiDBLite consensus disorder prediction 116 178 - -
Trre7g03965 317 MobiDBLite consensus disorder prediction 48 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03965 Trre-Chr7 47872034 47873098 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g03965 6 26 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT1G62970 71.429 8.31e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03965 - - var:108324594 126.331
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g03965 7 47872034 47873098 Trre3g00251 3 1644415 1645992 PCT