Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03929 ATGGCTATTTCCTTAGGTGCTGCATGTTGTATGTTATTTCTCACTATGATTAAAATTTTGCTTATAATAACTTGTCTGGGACAGTCCCTTACTCTATTATTAATTGGGCCTCTCTTACAGACCTATAGGAATCTCAATCACAATCAGCTCCAGCAAGCACTGAATAGATATGTTTTTCAACTCTTTGACAGGTATCTGCAAAACAACAAGTGTATAAAGTTAAATCAGCTAACAATAAATTATGGAGGGGTTGCTTCCTTTGCCCTTTTCAATGTCCATGGGAGTGATGATGCATCTGTAAAAGAAGCAGCAGCTGTCATAAAGTTATCTTCATCGAGAATGGCAACACAGTCCGAATGTCTCGGATATGAATTTGCCAAGTGGTTGGGAGTCCAAACGCCACAGGCTAGAGTCATTCACAATACCAGTTCAGAATGGCTCCAAATAAAAGAAGCTGCAGAAAAAGCAAGGGATGCAACAAGTTTTGAGCGTGATGCAATTGGTGAAACAACATGTTCAGAGCTTTTGGAAGCACTTGAGCTTAGTCGGTGTCTCTTGTTTATGAGAATGGATTAG 576 0.3958 MAISLGAACCMLFLTMIKILLIITCLGQSLTLLLIGPLLQTYRNLNHNQLQQALNRYVFQLFDRYLQNNKCIKLNQLTINYGGVASFALFNVHGSDDASVKEAAAVIKLSSSRMATQSECLGYEFAKWLGVQTPQARVIHNTSSEWLQIKEAAEKARDATSFERDAIGETTCSELLEALELSRCLLFMRMD 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03929 191 Pfam Actin-fragmin kinase, catalytic 83 179 IPR015275 -
Trre7g03929 191 SUPERFAMILY Protein kinase-like (PK-like) 74 189 IPR011009 -
Trre7g03929 191 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 73 189 IPR035010 GO:0004721|GO:0009737|GO:0043622
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03929 Trre-Chr7 47473004 47483222 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g03929 76 188 Protein tyrosine phosphatase (PTP) family AT5G23720 69.027 3.35e-46 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03929 K14165 - jre:109000311 162.925