Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre7g03920 | ATGGCAGCACCTTGCAACTTTCAGAAAATCCATCTTCTTGCTTTCTTTCTTTTAACATTATCACTCTTGTTTCTTGTAACATCTCATGCAGCTCCATTATCATTCAACTATGATCAACTTGGTAGTGACAAAACAAAAGCCTTCAATTTTTCAGGTACTGATGTCTATCAAGATAACCAAGTCCTTCAACTCACAAAGTATGAGAAAGACAGTCTAGGTAGAGTCACATATTCAAAACTGTTTCATCTTTGGGACATAAACACAAGTCAAGTCACAGATTTCACTACTCGTTTTTCATTTACTATTAACACCCCCAACAAAACCAATCATGGAGATGGCATCACTTTTTATTTGGCACATCCAAATTTTCCATTACCTGTTCCAAGAGATGGAAGTGGTATCGGTCTTGTAAGCCGTATTCAATTGAATAATCCAAATTTCACAAAAGAAAATCCATTTGTAGCTGTAGAATTTGATACTTTCGTTAATGAGTTCGATCCTAAATATGATCATGTTGGAATTGATGTTAATTCTATTAGCACTGCTTATACTACACAATGGTTCACTAGCATGGATGAAAGAGGTTATGATGCTGAAGTAAGTTATAATTCTAGTTCAAACAATTTATCTGTCATCTTCACAGGTTATCAAGATAACAAAATGATCCAACAACATTTGTCAAGTGTTGTTAATTTGAGAGAAGTCCTACCTGATTGGGTTGAATTCGGATTCACTTCGTCAACAGGATTGTTATGGGGGGAATATCATACTCTTAACTCATGGTCCTTCAACTCAAGTTTAGATTTTGAAGCAGAAAAGGATGGAACAAAAATAGGACTTGTTATAGGACTAAGTGTTGGCGGCGCTGTTGTTTTGATTTGTGTTATTGGGTTGGTTTGTTTTGTGAAATGGAAACTGAGGAATAAATATATGAGAGATGTTTTGCATTCTGATCTTGCAATGGATAGTGATTTTGAAAGAAGCTCTCTACCTAAGAAATTCACCTTTGAAGAACTTGCTAGAGCAACTAACAACTTTGCAAAAGAACATAAAATTGGAGAGGGCGGTTTCGGAGGAGTCTACAAGGGATTTATAAAAGACTTGAAAACTCATGTTGCTATAAAGAAAGTTTCTAAGGAATCAAATCAAGGAGTTAAGGAGTATGCATCTGAAGTTAAAGTCATTAGTCAATTAAGGCATAAGAATTTAGTTCAACTTTTTGGATGGTGTCACAGACAGAATGATCTACTTTTAGTTTATGAGTTTGTGCAAAATGGAAGCTTAGATTCTTATCTTTTCAAAGGAAAAGCCGGAACGTATGGTTATTTATCACCTGAAGCTGCTACTAGAGGTAAAGCTAGTAGAGAATCTGATGTATATAGTTTTGGAGTTGTAGCTTTGGAAATAGCTTGTGGTAGAAAAGCAATTGAACCAAGTCTTGGTGAAGATAATATTTACTTGGTGGATTGGGTTTGGGAACTTTATGGTATAGGTGAAGTTTTTAAAGCATGTGATTCAAGATTATATGGAGAATTCAATGAGAAAGAAATTGAGAGGTTAATGATAGTTGGACTTTGGTGTACTCATATTGATCATGTTCAAAGACCTATGATTAGACAAGTTGTTCAAGTGCTTAATTTTGATGCTCCATTGCCTACTCTTCCATTACAGATGAATATTGCTTCTACCTATAATACATCATTTTATTCTGTGTCCTCTAAATCTAAGACTCCTCCTGATTTTGCAACTAAGACTTCAACTTCAAGTAATAGTACCTTCACAGGGACAGGGTCCTCCTCCTCACAATCAAGCAATGCCTTTGGAGTCATTTCTCCATCAGCTGCACTTCTAAATACATTCTAG | 1863 | 0.3537 | MAAPCNFQKIHLLAFFLLTLSLLFLVTSHAAPLSFNYDQLGSDKTKAFNFSGTDVYQDNQVLQLTKYEKDSLGRVTYSKLFHLWDINTSQVTDFTTRFSFTINTPNKTNHGDGITFYLAHPNFPLPVPRDGSGIGLVSRIQLNNPNFTKENPFVAVEFDTFVNEFDPKYDHVGIDVNSISTAYTTQWFTSMDERGYDAEVSYNSSSNNLSVIFTGYQDNKMIQQHLSSVVNLREVLPDWVEFGFTSSTGLLWGEYHTLNSWSFNSSLDFEAEKDGTKIGLVIGLSVGGAVVLICVIGLVCFVKWKLRNKYMRDVLHSDLAMDSDFERSSLPKKFTFEELARATNNFAKEHKIGEGGFGGVYKGFIKDLKTHVAIKKVSKESNQGVKEYASEVKVISQLRHKNLVQLFGWCHRQNDLLLVYEFVQNGSLDSYLFKGKAGTYGYLSPEAATRGKASRESDVYSFGVVALEIACGRKAIEPSLGEDNIYLVDWVWELYGIGEVFKACDSRLYGEFNEKEIERLMIVGLWCTHIDHVQRPMIRQVVQVLNFDAPLPTLPLQMNIASTYNTSFYSVSSKSKTPPDFATKTSTSSNSTFTGTGSSSSQSSNAFGVISPSAALLNTF | 620 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre7g03920 | 620 | ProSitePatterns | Legume lectins beta-chain signature. | 154 | 160 | IPR019825 | - | |
Trre7g03920 | 620 | Pfam | Protein tyrosine and serine/threonine kinase | 349 | 434 | IPR001245 | GO:0004672|GO:0006468 | |
Trre7g03920 | 620 | Pfam | Protein tyrosine and serine/threonine kinase | 440 | 488 | IPR001245 | GO:0004672|GO:0006468 | |
Trre7g03920 | 620 | MobiDBLite | consensus disorder prediction | 571 | 604 | - | - | |
Trre7g03920 | 620 | ProSiteProfiles | Protein kinase domain profile. | 346 | 620 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre7g03920 | 620 | Gene3D | Transferase(Phosphotransferase) domain 1 | 419 | 547 | - | - | |
Trre7g03920 | 620 | PANTHER | - | 27 | 433 | - | - | |
Trre7g03920 | 620 | FunFam | Lectin-domain containing receptor kinase A4.3 | 424 | 565 | - | - | |
Trre7g03920 | 620 | ProSitePatterns | Legume lectins alpha-chain signature. | 236 | 245 | IPR000985 | - | |
Trre7g03920 | 620 | Pfam | Legume lectin domain | 33 | 273 | IPR001220 | GO:0030246 | |
Trre7g03920 | 620 | Gene3D | - | 31 | 281 | - | - | |
Trre7g03920 | 620 | SUPERFAMILY | Concanavalin A-like lectins/glucanases | 32 | 267 | IPR013320 | - | |
Trre7g03920 | 620 | SUPERFAMILY | Protein kinase-like (PK-like) | 330 | 567 | IPR011009 | - | |
Trre7g03920 | 620 | CDD | lectin_legume_LecRK_Arcelin_ConA | 33 | 267 | IPR001220 | GO:0030246 | |
Trre7g03920 | 620 | FunFam | L-type lectin-domain containing receptor kinase IX.1 | 331 | 422 | - | - | |
Trre7g03920 | 620 | ProSitePatterns | Protein kinases ATP-binding region signature. | 352 | 376 | IPR017441 | GO:0005524 | |
Trre7g03920 | 620 | Gene3D | Phosphorylase Kinase; domain 1 | 331 | 418 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre7g03920 | Trre-Chr7 | 47364722 | 47366794 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre7g03920 | 435 | 562 | Receptor kinase-like Gene Family | AT5G10530 | 54.198 | 5.24e-37 | 144 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_L-LEC | Trre7g03920 | Lectin_legB | 9.1e-60 | CL0004 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre7g03920 | - | - | cam:101491058 | 683.33 |