LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trre7g03919	ATGGCAGCACCTTGCAACTTTCAGAAAATCCATCTTCTTGCTTTCTTTCTTTTAACATTATCACTCTTGTTTCTTGTAACATCTCATGCAGCTCCATTATCATTCAACTATGATCAACTTGGTAGTGACAAAACAAAAGCCTTCAATTTTTCAGGTACTGATGTCTATCAAGATAACCAAGTCCTTCAACTCACAAAGTATGAGAAAGACAGTCTAGGTAGAGTCACATATTCAAAACTGTTTCATCTTTGGGACATAAACACAAGTCAAGTCACAGATTTCACTACTCGTTTTTCATTTACTATTAACACCCCCAACAAAACCAATCATGGAGATGGCATCACTTTTTATTTGGCACATCCAAATTTTCCATTACCTGTTCCAAGAGATGGAAGTGGTATCGGTCTTGTAAGCCGTATTCAATTGAATAATCCAAATTTCACAAAAGAAAATCCATTTGTAGCTGTAGAATTTGATACTTTCGTTAATGAGTTCGATCCTAAATATGATCATGTTGGAATTGATGTTAATTCTATTAGCACTGCTTATACTACACAATGGTTCACTAGCATGGATGAAAGAGGTTATGATGCTGAAGTAAGTTATAATTCTAGTTCAAACAATTTATCTGTCATCTTCACAGGTTATCAAGATAACAAAATGATCCAACAACATTTGTCAAGTGTTGTTAATTTGAGAGAAGTCCTACCTGATTGGGTTGAATTCGGATTCACTTCGTCAACAGGATTGTTATGGGGGGAATATCATACTCTTAACTCATGGTCCTTCAACTCAAGTTTAGATTTTGAAGCAGAAAAGGATGGAACAAAAATAGGACTTGTTATAGGACTAAGTGTTGGCGGCGCTGTTGTTTTGATTTGTGTTATTGGGTTGGTTTGTTTTGTGAAATGGAAACTGAGGAATAAATATATGAGAGATGTTTTGCATTCTGATCTTGCAATGGATAGTGATTTTGAAAGAAGCTCTCTACCTAAGAAATTCACCTTTGAAGAACTTGCTAGAGCAACTAACAACTTTGCAAAAGAACATAAAATTGGAGAGGGCGGTTTCGGAGGAGTCTACAAGGGATTTATAAAAGACTTGAAAACTCATGTTGCTATAAAGAAAGTTTCTAAGGAATCAAATCAAGGAGTTAAGGAGTATGCATCTGAAGTTAAAGTCATTAGTCAATTAAGGCATAAGAATTTAGTTCAACTTTTTGGATGGTGTCACAGACAGAATGATCTACTTTTAGTTTATGAGTTTGTGCAAAATGGAAGCTTAGATTCTTATCTTTTCAAAGGAAAAGGTTTACTAACATGGACAGTGAGATATAATATAGCTAGAGGTTTAGCCTCAGCATTATTATACCTTCATGAAGAGTGTGAGCAATGTGTACTTCATCGAGACATAAAACCGAGCAATATTATGTTGGATACTAATTTTAATACAAAGCTTGGAGATTTTGGTTTGGCTAGATTAATGAACCATGACATAGAATCAAAGACAACTGTTTTAGCCGGAACGTATGGTTATTTATCACCTGAAGCTGCTACTAGAGGTAAAGCTAGTAGAGAATCTGATGTATATAGTTTTGGAGTTGTAGCTTTGGAAATAGCTTGTGGTAGAAAAGCAATTGAACCAAGTCTTGGTGAAGATAATATTTACTTGGTGGATTGGGTTTGGGAACTTTATGGTATAGGTGAAGTTTTTAAAGCATGTGATTCAAGATTATATGGAGAATTCAATGAGAAAGAAATTGAGAGGTTAATGATAGTTGGACTTTGGTGTACTCATATTGATCATGTTCAAAGACCTATGATTAGACAAGTTGTTCAAGTGCTTAATTTTGATGCTCCATTGCCTACTCTTCCATTACAGATGAATATTGCTTCTACCTATAATACATCATTTTATTCTGTGTCCTCTAAATCTAAGACTCCTCCTGATTTTGCAACTAAGACTTCAACTTCAAGTAATAGTACCTTCACAGGGACAGGGTCCTCCTCCTCACAATCAAGCAATGCCTTTGGAGTCATTTCTCCATCAGCTGCACTTCTAAATACATTCTAG	2073	0.3521	MAAPCNFQKIHLLAFFLLTLSLLFLVTSHAAPLSFNYDQLGSDKTKAFNFSGTDVYQDNQVLQLTKYEKDSLGRVTYSKLFHLWDINTSQVTDFTTRFSFTINTPNKTNHGDGITFYLAHPNFPLPVPRDGSGIGLVSRIQLNNPNFTKENPFVAVEFDTFVNEFDPKYDHVGIDVNSISTAYTTQWFTSMDERGYDAEVSYNSSSNNLSVIFTGYQDNKMIQQHLSSVVNLREVLPDWVEFGFTSSTGLLWGEYHTLNSWSFNSSLDFEAEKDGTKIGLVIGLSVGGAVVLICVIGLVCFVKWKLRNKYMRDVLHSDLAMDSDFERSSLPKKFTFEELARATNNFAKEHKIGEGGFGGVYKGFIKDLKTHVAIKKVSKESNQGVKEYASEVKVISQLRHKNLVQLFGWCHRQNDLLLVYEFVQNGSLDSYLFKGKGLLTWTVRYNIARGLASALLYLHEECEQCVLHRDIKPSNIMLDTNFNTKLGDFGLARLMNHDIESKTTVLAGTYGYLSPEAATRGKASRESDVYSFGVVALEIACGRKAIEPSLGEDNIYLVDWVWELYGIGEVFKACDSRLYGEFNEKEIERLMIVGLWCTHIDHVQRPMIRQVVQVLNFDAPLPTLPLQMNIASTYNTSFYSVSSKSKTPPDFATKTSTSSNSTFTGTGSSSSQSSNAFGVISPSAALLNTF	690

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trre7g03919	690	PANTHER	-	27	622	-	-
	Trre7g03919	690	ProSitePatterns	Legume lectins alpha-chain signature.	236	245	IPR000985	-
	Trre7g03919	690	SUPERFAMILY	Protein kinase-like (PK-like)	330	637	IPR011009	-
	Trre7g03919	690	Pfam	Protein kinase domain	347	612	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Trre7g03919	690	CDD	lectin_legume_LecRK_Arcelin_ConA	33	267	IPR001220	GO:0030246
	Trre7g03919	690	ProSitePatterns	Protein kinases ATP-binding region signature.	352	376	IPR017441	GO:0005524
	Trre7g03919	690	FunFam	Lectin-domain containing receptor kinase A4.3	423	635	-	-
	Trre7g03919	690	SMART	serkin_6	346	621	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Trre7g03919	690	FunFam	L-type lectin-domain containing receptor kinase IX.1	331	422	-	-
	Trre7g03919	690	ProSitePatterns	Legume lectins beta-chain signature.	154	160	IPR019825	-
	Trre7g03919	690	Gene3D	Phosphorylase Kinase; domain 1	331	422	-	-
	Trre7g03919	690	Gene3D	Transferase(Phosphotransferase) domain 1	423	636	-	-
	Trre7g03919	690	CDD	STKc_IRAK	352	616	-	-
	Trre7g03919	690	MobiDBLite	consensus disorder prediction	641	674	-	-
	Trre7g03919	690	SUPERFAMILY	Concanavalin A-like lectins/glucanases	32	267	IPR013320	-
	Trre7g03919	690	Pfam	Legume lectin domain	33	273	IPR001220	GO:0030246
	Trre7g03919	690	ProSiteProfiles	Protein kinase domain profile.	346	624	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Trre7g03919	690	Gene3D	-	31	281	-	-
	Trre7g03919	690	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	466	478	IPR008271	GO:0004672\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Trre7g03919	Trre-Chr7	47364722	47366794	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Trre7g03919	22	632	Receptor kinase-like Gene Family	AT5G10530	45.873	2.41e-169	498

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_L-LEC	Trre7g03919		Pkinase	2.1e-49	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trre7g03919	-		-	cam:101491058	1077.39