LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trre7g03917	ATGGTCTTTGCAGCACCAAAAGCAATACATGTCCAGTTCCACAATTATTTTTTGTTATCAATTTTCTTACTCTTAAATTTGATTATTCCAAATGTATCCTCACTAGCCTTCAACTTCACTAGTTTTGATCCTAATGAAAAAACCATAATCTATGAAGGATCAGCAAATCCTGAATCATTAGCTATCCAACTTACTAGAAACTATGGAAGCATTGGTAGAGCCACAAACATTTATGGAGATGGTATGGCATTCTTTCTTGCCCCTTATGGTTCAAAGATGCCTAATGCTACAAAAGGTCGTTCTATGGGTCTAACACTTGATGACCAAGCAATGAACTCAACTGTAACTAATCCATTTGTTGCTGTTGAGTTTGATATCTACTATAAGAATCCTTGGGATCCACCTCATGAACATGCCGGAATCGATATCAACTCAATGATATCTGTTGCTAATGTGACATGGTTGGCTGATATCAAAGAAGGTAAACTCAATGAGGCTTGGGTAAGTTACAATGCTAGTTCATTAAATCTAAGTGTTGTATTCACTGGTTTTGATAATGTAACCTCTACCATTGTGCATCAACATCTATCTTCCATTGTTGATCTCAGACTTTATCTACCAGAATTTGTTACTATTGGCTTCTCAGCTGCTACAGGAAATGATACTGCTATTCATACTCTCAATTCATGGGATTTTAGCTCAAATTTGGAAGCAGAACAAGATAAAAAGTCCAAGACAGGAATAGCATTGGGACTAGGAGTTGGTGGATTTGTTTTGATTGGTGTGTTCGGTTTTATATCAGTTTGCCTGTGGAATAAGTCGAAGAGAGGAAGTGAAAAGGAAGATGGTGAATTTCAACAGTACATAGGTGAGGATTTTGGAAGTGGAGGACCCAAGAAGTATACATATGCAGAATTAGCACATGCAGCTAATAATTTTAAAGATGAACATAAGCTAGGACAAGGAGGATTTGGAGGTGTTTATAGAGGTTTTCTTAAAGACATAAAATCTTATGTTGCTATCAAGAGGGTGTCAGAAGATTCTCATCAAGGGATAAAGGAGTTTGCATCAGAAGTAACAATTATTAGCAAATTAAGGCACAGAAATCTAGTGCAATTGATTGGTTGGTGTCATGACAGAAAGAAACTCTTGCTTGTATATGAGTACATGCAAAATGGTAGTTTAGACATTCATCTTTTCAAAAAACAAAGCTTTTTGAAATGGGCTATTAGGTATACAGTTGCTAGAGGCTTAGCTTCTGCATTGTTATATTTGCATGAAGAATGGGTACAATGTGTTATACACAGAGACATAAAAGCAAGCAACATAATGTTGGATTCAGAGTTCAATGTTAAACTTGGAGATTTTGGTTTAGCAAGGTTTGTGGATCATGCAAACGGTGGACAAACTACAGCTTTTGCAGGGACTGTAGGATACATGGCTCCTGAATGTGCTACCATAGGAAGGGCTAGTAAAGAAACAGATGTGTATAGTTTTGGAATTGTTGCTTTAGAGATAGCTTGTGGAAGAAAACCTATCATTAAGGCTCAAGAAAATGAAATAAATATTGTGGAGTGGGTTTGGGGGCTATATGGAAGTGGGAGAATTCTTGAAGCAGTAGATCCAAGACTAGGTGAAGATTTTGAAGAGGAACAAATTAAGTGCTTAATGATTGTTGGTCTTTGGTGTACTCATCCTGATCCTAATAATAGGCCTTCAATAAGACAAGCTACTCAAGTGCTTAATTTTGAAGCTACATTACCTAATCTTCCATCAAGTATGCCTATACCAACATATCTTGAAGGTCCTTTGAACTCATTCACTATTCCATCCACCATAAATGGTTCAGAGGAAGGTCAAAACATGAATACAGTAAGCTTGATTAGTTCAAACACAAACTCATCTGAGGTCACTACTTCTGATGATGATTCTTCTTCTGAGTCAGTTTTGTATTCTAGATAA	1962	0.3665	MVFAAPKAIHVQFHNYFLLSIFLLLNLIIPNVSSLAFNFTSFDPNEKTIIYEGSANPESLAIQLTRNYGSIGRATNIYGDGMAFFLAPYGSKMPNATKGRSMGLTLDDQAMNSTVTNPFVAVEFDIYYKNPWDPPHEHAGIDINSMISVANVTWLADIKEGKLNEAWVSYNASSLNLSVVFTGFDNVTSTIVHQHLSSIVDLRLYLPEFVTIGFSAATGNDTAIHTLNSWDFSSNLEAEQDKKSKTGIALGLGVGGFVLIGVFGFISVCLWNKSKRGSEKEDGEFQQYIGEDFGSGGPKKYTYAELAHAANNFKDEHKLGQGGFGGVYRGFLKDIKSYVAIKRVSEDSHQGIKEFASEVTIISKLRHRNLVQLIGWCHDRKKLLLVYEYMQNGSLDIHLFKKQSFLKWAIRYTVARGLASALLYLHEEWVQCVIHRDIKASNIMLDSEFNVKLGDFGLARFVDHANGGQTTAFAGTVGYMAPECATIGRASKETDVYSFGIVALEIACGRKPIIKAQENEINIVEWVWGLYGSGRILEAVDPRLGEDFEEEQIKCLMIVGLWCTHPDPNNRPSIRQATQVLNFEATLPNLPSSMPIPTYLEGPLNSFTIPSTINGSEEGQNMNTVSLISSNTNSSEVTTSDDDSSSESVLYSR	653

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trre7g03917	653	ProSiteProfiles	Protein kinase domain profile.	313	587	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Trre7g03917	653	MobiDBLite	consensus disorder prediction	630	653	-	-
	Trre7g03917	653	FunFam	L-type lectin-domain containing receptor kinase IX.1	298	389	-	-
	Trre7g03917	653	SUPERFAMILY	Concanavalin A-like lectins/glucanases	33	242	IPR013320	-
	Trre7g03917	653	Gene3D	Transferase(Phosphotransferase) domain 1	390	602	-	-
	Trre7g03917	653	ProSitePatterns	Legume lectins alpha-chain signature.	206	215	IPR000985	-
	Trre7g03917	653	Gene3D	Phosphorylase Kinase; domain 1	298	389	-	-
	Trre7g03917	653	CDD	STKc_IRAK	319	582	-	-
	Trre7g03917	653	FunFam	Lectin-domain containing receptor kinase A4.3	390	601	-	-
	Trre7g03917	653	SUPERFAMILY	Protein kinase-like (PK-like)	298	598	IPR011009	-
	Trre7g03917	653	Pfam	Protein kinase domain	313	579	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Trre7g03917	653	Pfam	Legume lectin domain	75	244	IPR001220	GO:0030246
	Trre7g03917	653	PANTHER	-	66	591	-	-
	Trre7g03917	653	SMART	serkin_6	313	586	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Trre7g03917	653	ProSitePatterns	Protein kinases ATP-binding region signature.	319	342	IPR017441	GO:0005524
	Trre7g03917	653	Gene3D	-	32	250	-	-
	Trre7g03917	653	CDD	lectin_legume_LecRK_Arcelin_ConA	35	236	IPR001220	GO:0030246
	Trre7g03917	653	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	433	445	IPR008271	GO:0004672\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Trre7g03917	Trre-Chr7	47349399	47351452	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Trre7g03917	27	599	Receptor kinase-like Gene Family	AT5G10530	46.117	7.98e-180	524

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_L-LEC	Trre7g03917		Pkinase	1.1e-52	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trre7g03917	-		-	cam:101491058	933.71