Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre7g03916 | ATGGTCTTTGCAGCACCAAAAGCAATACATGTCCAGTTCCACAATTATTTTTTGTTATCAATTTTCTTACTCTTAAATTTGATTATTCCAAATGTATCCTCACTAGCCTTCAACTTCACTAGTTTTGATCCTAATGAAAAAACCATAATCTATGAAGGATCAGCAAATCCTGAATCATTAGCTATCCAACTTACTAGAAACTATGGAAGCATTGGTAGAGCCACAAACATTTATGGAGATGGTATGGCATTCTTTCTTGCCCCTTATGGTTCAAAGATGCCTAATGCTACAAAAGGTCGTTCTATGGGTCTAACACTTGATGACCAAGCAATGAACTCAACTGTAACTAATCCATTTGTTGCTGTTGAGTTTGATATCTACTATAAGAATCCTTGGGATCCACCTCATGAACATGCCGGAATCGATATCAACTCAATGATATCTGTTGCTAATGTGACATGGTTGGCTGATATCAAAGAAGGTAAACTCAATGAGGCTTGGGTAAGTTACAATGCTAGTTCATTAAATCTAAGTGTTGTATTCACTGGTTTTGATAATGTAACCTCTACCATTGTGCATCAACATCTATCTTCCATTGTTGATCTCAGACTTTATCTACCAGAATTTGTTACTATTGGCTTCTCAGCTGCTACAGGAAATGATACTGCTATTCATACTCTCAATTCATGGGATTTTAGCTCAAATTTGGAAGCAGAACAAGATAAAAAGTCCAAGACAGGAATAGCATTGGGACTAGGAGTTGGTGGATTTGTTTTGATTGGTGTGTTCGGTTTTATATCAGTTTGCCTGTGGAATAAGTCGAAGAGAGGAAGTGAAAAGGAAGATGGTGAATTTCAACAGTACATAGGTGAGGATTTTGGAAGTGGAGGACCCAAGAAGTATACATATGCAGAATTAGCACATGCAGCTAATAATTTTAAAGATGAACATAAGCTAGGACAAGGAGGATTTGGAGGTGTTTATAGAGGTTTTCTTAAAGACATAAAATCTTATGTTGCTATCAAGAGGGTGTCAGAAGATTCTCATCAAGGGATAAAGGAGTTTGCATCAGAAGTAACAATTATTAGCAAATTAAGGCACAGAAATCTAGTGCAATTGATTGAGATAGCTTGTGGAAGAAAACCTATCATTAAGGCTCAAGAAAATGAAATAAATATTGTGGAGTGGGTTTGGGGGCTATATGGAAGTGGGAGAATTCTTGAAGCAGTAGATCCAAGACTAGGTGAAGATTTTGAAGAGGAACAAATTAAGTGCTTAATGATTGTTGGTCTTTGGTGTACTCATCCTGATCCTAATAATAGGCCTTCAATAAGACAAGCTACTCAAGTGCTTAATTTTGAAGCTACATTACCTAATCTTCCATCAAGTATGCCTATACCAACATATCTTGAAGGTCCTTTGAACTCATTCACTATTCCATCCACCATAAATGGTTCAGAGGAAGGTCAAAACATGAATACAGTAAGCTTGATTAGTTCAAACACAAACTCATCTGAGGTCACTACTTCTGATGATGATTCTTCTTCTGAGTCAGTTTTGTATTCTAGATAA | 1572 | 0.3651 | MVFAAPKAIHVQFHNYFLLSIFLLLNLIIPNVSSLAFNFTSFDPNEKTIIYEGSANPESLAIQLTRNYGSIGRATNIYGDGMAFFLAPYGSKMPNATKGRSMGLTLDDQAMNSTVTNPFVAVEFDIYYKNPWDPPHEHAGIDINSMISVANVTWLADIKEGKLNEAWVSYNASSLNLSVVFTGFDNVTSTIVHQHLSSIVDLRLYLPEFVTIGFSAATGNDTAIHTLNSWDFSSNLEAEQDKKSKTGIALGLGVGGFVLIGVFGFISVCLWNKSKRGSEKEDGEFQQYIGEDFGSGGPKKYTYAELAHAANNFKDEHKLGQGGFGGVYRGFLKDIKSYVAIKRVSEDSHQGIKEFASEVTIISKLRHRNLVQLIEIACGRKPIIKAQENEINIVEWVWGLYGSGRILEAVDPRLGEDFEEEQIKCLMIVGLWCTHPDPNNRPSIRQATQVLNFEATLPNLPSSMPIPTYLEGPLNSFTIPSTINGSEEGQNMNTVSLISSNTNSSEVTTSDDDSSSESVLYSR | 523 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre7g03916 | 523 | Gene3D | - | 32 | 250 | - | - | |
Trre7g03916 | 523 | PANTHER | - | 373 | 461 | - | - | |
Trre7g03916 | 523 | Gene3D | Phosphorylase Kinase; domain 1 | 298 | 384 | - | - | |
Trre7g03916 | 523 | MobiDBLite | consensus disorder prediction | 500 | 523 | - | - | |
Trre7g03916 | 523 | SUPERFAMILY | Protein kinase-like (PK-like) | 373 | 468 | IPR011009 | - | |
Trre7g03916 | 523 | ProSitePatterns | Legume lectins alpha-chain signature. | 206 | 215 | IPR000985 | - | |
Trre7g03916 | 523 | ProSitePatterns | Protein kinases ATP-binding region signature. | 319 | 342 | IPR017441 | GO:0005524 | |
Trre7g03916 | 523 | ProSiteProfiles | Protein kinase domain profile. | 313 | 523 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre7g03916 | 523 | SUPERFAMILY | Protein kinase-like (PK-like) | 297 | 381 | IPR011009 | - | |
Trre7g03916 | 523 | Pfam | Legume lectin domain | 75 | 244 | IPR001220 | GO:0030246 | |
Trre7g03916 | 523 | CDD | lectin_legume_LecRK_Arcelin_ConA | 35 | 236 | IPR001220 | GO:0030246 | |
Trre7g03916 | 523 | SUPERFAMILY | Concanavalin A-like lectins/glucanases | 33 | 242 | IPR013320 | - | |
Trre7g03916 | 523 | SMART | tyrkin_6 | 313 | 451 | IPR020635 | GO:0004713|GO:0006468 | |
Trre7g03916 | 523 | Pfam | Protein kinase domain | 313 | 377 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre7g03916 | Trre-Chr7 | 47349399 | 47351452 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre7g03916 | 371 | 469 | Receptor kinase-like Gene Family | AT5G10530 | 52.427 | 6.38e-28 | 116 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_L-LEC | Trre7g03916 | Lectin_legB | 4.7e-45 | CL0004 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre7g03916 | - | - | cam:101491058 | 517.309 |