Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03916 ATGGTCTTTGCAGCACCAAAAGCAATACATGTCCAGTTCCACAATTATTTTTTGTTATCAATTTTCTTACTCTTAAATTTGATTATTCCAAATGTATCCTCACTAGCCTTCAACTTCACTAGTTTTGATCCTAATGAAAAAACCATAATCTATGAAGGATCAGCAAATCCTGAATCATTAGCTATCCAACTTACTAGAAACTATGGAAGCATTGGTAGAGCCACAAACATTTATGGAGATGGTATGGCATTCTTTCTTGCCCCTTATGGTTCAAAGATGCCTAATGCTACAAAAGGTCGTTCTATGGGTCTAACACTTGATGACCAAGCAATGAACTCAACTGTAACTAATCCATTTGTTGCTGTTGAGTTTGATATCTACTATAAGAATCCTTGGGATCCACCTCATGAACATGCCGGAATCGATATCAACTCAATGATATCTGTTGCTAATGTGACATGGTTGGCTGATATCAAAGAAGGTAAACTCAATGAGGCTTGGGTAAGTTACAATGCTAGTTCATTAAATCTAAGTGTTGTATTCACTGGTTTTGATAATGTAACCTCTACCATTGTGCATCAACATCTATCTTCCATTGTTGATCTCAGACTTTATCTACCAGAATTTGTTACTATTGGCTTCTCAGCTGCTACAGGAAATGATACTGCTATTCATACTCTCAATTCATGGGATTTTAGCTCAAATTTGGAAGCAGAACAAGATAAAAAGTCCAAGACAGGAATAGCATTGGGACTAGGAGTTGGTGGATTTGTTTTGATTGGTGTGTTCGGTTTTATATCAGTTTGCCTGTGGAATAAGTCGAAGAGAGGAAGTGAAAAGGAAGATGGTGAATTTCAACAGTACATAGGTGAGGATTTTGGAAGTGGAGGACCCAAGAAGTATACATATGCAGAATTAGCACATGCAGCTAATAATTTTAAAGATGAACATAAGCTAGGACAAGGAGGATTTGGAGGTGTTTATAGAGGTTTTCTTAAAGACATAAAATCTTATGTTGCTATCAAGAGGGTGTCAGAAGATTCTCATCAAGGGATAAAGGAGTTTGCATCAGAAGTAACAATTATTAGCAAATTAAGGCACAGAAATCTAGTGCAATTGATTGAGATAGCTTGTGGAAGAAAACCTATCATTAAGGCTCAAGAAAATGAAATAAATATTGTGGAGTGGGTTTGGGGGCTATATGGAAGTGGGAGAATTCTTGAAGCAGTAGATCCAAGACTAGGTGAAGATTTTGAAGAGGAACAAATTAAGTGCTTAATGATTGTTGGTCTTTGGTGTACTCATCCTGATCCTAATAATAGGCCTTCAATAAGACAAGCTACTCAAGTGCTTAATTTTGAAGCTACATTACCTAATCTTCCATCAAGTATGCCTATACCAACATATCTTGAAGGTCCTTTGAACTCATTCACTATTCCATCCACCATAAATGGTTCAGAGGAAGGTCAAAACATGAATACAGTAAGCTTGATTAGTTCAAACACAAACTCATCTGAGGTCACTACTTCTGATGATGATTCTTCTTCTGAGTCAGTTTTGTATTCTAGATAA 1572 0.3651 MVFAAPKAIHVQFHNYFLLSIFLLLNLIIPNVSSLAFNFTSFDPNEKTIIYEGSANPESLAIQLTRNYGSIGRATNIYGDGMAFFLAPYGSKMPNATKGRSMGLTLDDQAMNSTVTNPFVAVEFDIYYKNPWDPPHEHAGIDINSMISVANVTWLADIKEGKLNEAWVSYNASSLNLSVVFTGFDNVTSTIVHQHLSSIVDLRLYLPEFVTIGFSAATGNDTAIHTLNSWDFSSNLEAEQDKKSKTGIALGLGVGGFVLIGVFGFISVCLWNKSKRGSEKEDGEFQQYIGEDFGSGGPKKYTYAELAHAANNFKDEHKLGQGGFGGVYRGFLKDIKSYVAIKRVSEDSHQGIKEFASEVTIISKLRHRNLVQLIEIACGRKPIIKAQENEINIVEWVWGLYGSGRILEAVDPRLGEDFEEEQIKCLMIVGLWCTHPDPNNRPSIRQATQVLNFEATLPNLPSSMPIPTYLEGPLNSFTIPSTINGSEEGQNMNTVSLISSNTNSSEVTTSDDDSSSESVLYSR 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03916 523 Gene3D - 32 250 - -
Trre7g03916 523 PANTHER - 373 461 - -
Trre7g03916 523 Gene3D Phosphorylase Kinase; domain 1 298 384 - -
Trre7g03916 523 MobiDBLite consensus disorder prediction 500 523 - -
Trre7g03916 523 SUPERFAMILY Protein kinase-like (PK-like) 373 468 IPR011009 -
Trre7g03916 523 ProSitePatterns Legume lectins alpha-chain signature. 206 215 IPR000985 -
Trre7g03916 523 ProSitePatterns Protein kinases ATP-binding region signature. 319 342 IPR017441 GO:0005524
Trre7g03916 523 ProSiteProfiles Protein kinase domain profile. 313 523 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g03916 523 SUPERFAMILY Protein kinase-like (PK-like) 297 381 IPR011009 -
Trre7g03916 523 Pfam Legume lectin domain 75 244 IPR001220 GO:0030246
Trre7g03916 523 CDD lectin_legume_LecRK_Arcelin_ConA 35 236 IPR001220 GO:0030246
Trre7g03916 523 SUPERFAMILY Concanavalin A-like lectins/glucanases 33 242 IPR013320 -
Trre7g03916 523 SMART tyrkin_6 313 451 IPR020635 GO:0004713|GO:0006468
Trre7g03916 523 Pfam Protein kinase domain 313 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03916 Trre-Chr7 47349399 47351452 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g03916 371 469 Receptor kinase-like Gene Family AT5G10530 52.427 6.38e-28 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Trre7g03916 Lectin_legB 4.7e-45 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03916 - - cam:101491058 517.309