Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03915 ATGCAGGAACACAGATCAGAATGGGCAGATACAAGTATTGATGCATATTCAGCTGCTGCCGTTAAAGCCGGTCCATGTAGCTTACCAGAGGCCAGAGCTGGTGGTCAGGTTATTCTTCCCCTAGCTCACACAATTGAGCATGAAGAGTTCATGGAGGTTATTAAGCTTGAAAACATGGGCTACTTTAGGGACGATATGACAATGCCTGGTGATATTTTCCTCTTACAAATAAGTTGTATTTTAGAATTCCATTCTTTTGAACATATCTATTTGCAGTCTCTTCAACTTGCTATAAGAATATTTAGACTTTGTAGTGGAGTGGACGAGCATGCAGTTGGCACAAGTGTAGAGTTTATTTTTGTTCCAATAGATGCATCTTTCTATGATGATGCACCCATTTTGCCTTCTGGTTTTTGCATCATACCTCTTGATTCTGCCACGACAAGATGCTTCCAAACCGTACACTTGATCTTGCTTCTGCACTTGAAGTTGGATGATGGTAGAGCTTGGCTGTGGTGA 519 0.4143 MQEHRSEWADTSIDAYSAAAVKAGPCSLPEARAGGQVILPLAHTIEHEEFMEVIKLENMGYFRDDMTMPGDIFLLQISCILEFHSFEHIYLQSLQLAIRIFRLCSGVDEHAVGTSVEFIFVPIDASFYDDAPILPSGFCIIPLDSATTRCFQTVHLILLLHLKLDDGRAWLW 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03915 172 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 1 80 IPR044830 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03915 Trre-Chr7 47348105 47348964 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g03915 1 147 Homeobox Transcription Factor Family AT4G32880 60.667 1.72e-52 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03915 K09338 - gmx:100797291 201.06