Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03910 ATGGTTCATATATTCTGTTATGCAAGGGAAACAATTTTGCTTATTCTGATAGTCCCTCTTGCACATGTTCACCCTGTGTCTTTTGATTACCCTATGTTTGGTGATGATAACAAAGATCCACCAAAGCTTCAAGGCGATGCTATTGAAGATACTAATGTTATTCGACTCACTGGGCACCCCGGTGGCCCAAATAAGACTTCTGGTGTTGGCCGAGTCAGAAGTCCCAGGCTTATCAAACTTTATGACAATAGAACAAATCAACTGTATGACTTTACTACGAAGTTTTCTTTTGTTATATTTTCAAATCACAGTAATCATGGAGATGGCTTGGCATTTTTCCTTGCGAGCTCAGGACTTCCAACAACAAATCATATAGGAGGTGGAGGGGGTTTTGGTCTTGTGACTGCAAGCGAAATTTATACAAACTCAACTGAGTATTCGGTTGTGTCAGTGGAGTTTGACACATTCCAAAACAAATGGGACCCAAGTTTCAACCATGTGGGCGTGAATATCAATTCTGTGGTGTCCGACACATATATTGAATGGTCTGCAGATGTTACAAAAAGGAAAGTTTTTGATTGTAGCATTGAATACAGCTCTAGAAATAAGAATCTGATTGTTTCTTTCACTGGACACAGATTGAATGAAGAGCAAAAAATTGTACACACCATTGATCTTAAAGAGTATTTACCAGAGGAAGTTTATGTTGGCATATCAGCTTCAACAGGAATTGGAAATGTAGATGAGGAACATACACTGCAGTCATGGTCTTTTAGTACAAGTTATGAAGATGATCCTGAGAAGAAAAGTAACATAATCATAAATAGATTGTTGGATGGAGTAGCAAGTGGTGGCCTAATAACGGTATATTTGAGCTGCATAATAATGTTATTCATTGCATTGTGGAAGAAGAGTAAAGAAAAAGAAGAAGAAACTGCTACGTCAGAAACCATTTCTGATCAGAATATGGATGAAGAATTCCAAATGGGTGCTGGACCTAAGAAGATTTCTTATCAGGAACTATTGGATGCAACAAACAACTTTGAAGAGACACTGAAGCTTGGTCAAGGTGGTTTTGGTGGTGTTTACAAAGGTTATTTTAAAGAGACAGACTCAGTTGCAGCTATAAAGAGGGGAATATCAGCAAATGCACGGCAGGGTATAAAGCAATACTCAGCAGAAGTGAAGATCATTAGCCAATTGAGACATAAAAATTTGGTGAAACTCAATGGTTGGTGCCACAAGAAGAATGAACTTATCCTAATATACGAATACATGCCTAATGGAAGCTTAGATTATCATCTTTTTCGCGGAGGAAGCATCTTGTCATGGCACTTGAGGTACAATATAGCTCTTGGGTTGGCCTCAGCATTGCTTTATTTGCAGGAAGAATGGGAAAAATGTGTGATTCATAGGGACATAAAATCAAGCAACATAATGTTGGACTCCAACTTCAATACTAAGCTTGGGGATTTTGGGCTAGCTAGGATGATGGATCATGAGAAAGGGTCAGAAACTACAGTTGTGGCTGGAACCAGAGGTTACCTAGCTCCTGAATACATGGACACAGGCAAGGCTAGAAAAGAATCCGACATATTCAGTTTCGGGGTCGTATTGTTGGAAATAGCCTGTGGAAAAAAGGCCATACACTACCAAGAATTGGAGGGTGAAGTATCATTAGTGGAGTGGGTTTGGGAGCTATATGGATTGAAAAATATCATTGGAGCAGCAGATCCAAAACTATACGGGCAATTTGATGTGAAGGAATTGGAATGTTTGTTAGTAGTTGGACTTTGGTGTGCTAATCCAGATAGCACATCAAGACCATCTATAAAGAAAGTGATTAAGGCGCTAAACTTTGAAACTCCATTACCAATTCTCCCACAAAATATGCCATCCCTAGCTCCTTTGACTACCACAACAACTGAGCAATTTTTGTCAGTTCCTTCTTTCTTTAGGTTTACAGGTTAG 1971 0.3912 MVHIFCYARETILLILIVPLAHVHPVSFDYPMFGDDNKDPPKLQGDAIEDTNVIRLTGHPGGPNKTSGVGRVRSPRLIKLYDNRTNQLYDFTTKFSFVIFSNHSNHGDGLAFFLASSGLPTTNHIGGGGGFGLVTASEIYTNSTEYSVVSVEFDTFQNKWDPSFNHVGVNINSVVSDTYIEWSADVTKRKVFDCSIEYSSRNKNLIVSFTGHRLNEEQKIVHTIDLKEYLPEEVYVGISASTGIGNVDEEHTLQSWSFSTSYEDDPEKKSNIIINRLLDGVASGGLITVYLSCIIMLFIALWKKSKEKEEETATSETISDQNMDEEFQMGAGPKKISYQELLDATNNFEETLKLGQGGFGGVYKGYFKETDSVAAIKRGISANARQGIKQYSAEVKIISQLRHKNLVKLNGWCHKKNELILIYEYMPNGSLDYHLFRGGSILSWHLRYNIALGLASALLYLQEEWEKCVIHRDIKSSNIMLDSNFNTKLGDFGLARMMDHEKGSETTVVAGTRGYLAPEYMDTGKARKESDIFSFGVVLLEIACGKKAIHYQELEGEVSLVEWVWELYGLKNIIGAADPKLYGQFDVKELECLLVVGLWCANPDSTSRPSIKKVIKALNFETPLPILPQNMPSLAPLTTTTTEQFLSVPSFFRFTG 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03910 656 SMART serkin_6 348 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g03910 656 Gene3D Phosphorylase Kinase; domain 1 333 425 - -
Trre7g03910 656 ProSiteProfiles Protein kinase domain profile. 348 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g03910 656 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 266 IPR013320 -
Trre7g03910 656 CDD lectin_legume_LecRK_Arcelin_ConA 26 261 IPR001220 GO:0030246
Trre7g03910 656 Pfam Protein kinase domain 349 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g03910 656 ProSitePatterns Protein kinases ATP-binding region signature. 354 377 IPR017441 GO:0005524
Trre7g03910 656 ProSitePatterns Legume lectins beta-chain signature. 149 155 IPR019825 -
Trre7g03910 656 Gene3D - 24 278 - -
Trre7g03910 656 FunFam Lectin-domain containing receptor kinase A4.3 426 637 - -
Trre7g03910 656 ProSitePatterns Serine/Threonine protein kinases active-site signature. 469 481 IPR008271 GO:0004672|GO:0006468
Trre7g03910 656 Pfam Legume lectin domain 26 269 IPR001220 GO:0030246
Trre7g03910 656 CDD STKc_IRAK 354 619 - -
Trre7g03910 656 FunFam receptor-like protein kinase FERONIA 306 425 - -
Trre7g03910 656 Gene3D Transferase(Phosphotransferase) domain 1 426 634 - -
Trre7g03910 656 PANTHER - 68 622 - -
Trre7g03910 656 SUPERFAMILY Protein kinase-like (PK-like) 333 635 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03910 Trre-Chr7 47318419 47320389 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g03910 8 632 Receptor kinase-like Gene Family AT5G10530 44.582 2.51e-173 507
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Trre7g03910 Pkinase 8.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03910 - - cam:101492002 943.34