LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trre7g03909	ATGACTCCTTTGCATGCTATTCTTCACACTCAAACACTTGTTTTTTGTTATGCAATAGGAACCATTTCCACGCTGCAAATAATCCATCTTGCAAACTCACTGTCATTTGATTACCCCTACTTTAACAATGGTGATGTCGATTGGGAAGGTGATGCTTCTCCTTATAAAGGAGCTATTCAAATGCATCTCTGGGATTTCAACTCTGGAAAACTCTCTGACTTCACCACCGAGTTTTCCTTTGTTATTTTTTCAAAAACAAGGGATTATGGAGACGGAATGGCATTCTTCTTGGCCGATCCAAATCTCCCACTTTTGAAGAAGATCAAAGAAGGTGGCGGTCTTGGCCTTGTGGATGGAGACCAAGTACTAAAATCAACTCAACACCCATTTGTGGCAGTAGAGTTCGACACCTTCAATAATCCATGGGACCCTTCAGGTGAAGGCACTCATGTTGGCTTGAATTTCAACTCTATGAGGTCTAACATAACTAAGCCATGGTTGACAAATATTCTTGAATGGAGAATTTATAATTGCAGCATTAAATACAATTCCAGCACTCTCAATTTGAGGGTGTCATTCACCATGTATGATAATGATGATAAACCAGTTGAAGAGCACATATCACATAAGGTTGATTTGAGAGATTTCTTACCTGAGAAGGTTATTGTTGGATTCTCTGCTGCAACAGGAAGATTGTATGAGGTGCATACTCTTCGATCATGGTCATTTAGTTCAAGTCTACTAAGTGATGAGAACAGATATCAGATTGCGGCACCGACCTCCAGTCCTGTAATTTCTGAACAAGGAAATAACATAGGGTTGAAGGTAGGTCTTGGAATTGGTACAGGCTTGGCTGTAAGTTTATCAGGGCTGGTTTGTACTCTATTATGGAAAAGGCGTAGAGGGAGGAAAAGAGAGTTTGGTTTCGATCTCAACATGGATGATGAATTCCAAAAGGGATCTGGACCTAAGAGGTTTTTCTACAATGAACTAGTGAGTGCAACAAACAAATTTTCGGAGTCAGATAAGGTGGGACAAGGTGGTTTTGGTGGTGTATACAAAGGTTATTTGAAAGACCTGAACTCCTATGTTGCTATCAAGAGAATGTCAAAAGAGTCTAAACAGGGAATACTAGAATATGTGACTGAAGTGAAAGTCATTAGTCAATTGAGACACAGAAATCTAGTACAGCTTCTTGGTTGGTGCCACAGGAAGAATGATTTTCTACTAATATATGAGTTTATGTCAAATGGAAGCTTAGATTCCCATCTATACGGTAAAAGAAGCATCTTAACATGGACAGCGAGGTATAACATCGCATTGGGCTTGGCTTCAGCATTGCTTTACCTACAGGAAGAATGGGAGCAGTGTGTGCTTCACAGGGACATTAAATCAAGCAACATTATGTTGGATTCATGTTTTAATGCTAAGCTTGGCGATTTTGGTTTAGCTAGGCTGGTAGATCATGCGAAAGGGTCACAAACCACACTTATAGCTGGAACAAGGGGTTATATTGCACCTGAATATTTCACATCAGGAAAGGCTACTAAAGAATCTGATATATACAGCTTTGGTGTAGTGTTATTGGAAATAGTCACTGGTAGGAAAGCTATTGAAAGAGAAGAAAAGGAAGATCAAATAAGTGTAGTTGAGTGGGTTTGGGATCTCTATGGATTTGGAAAGTTCCTTCAAGCAGCTGACCCTAAGTTATGTGGAGCATTTGATGAGAAGCAATTGGAACATTTGGTAGTTGTTGGCCTTTGGTGTGTTCATCCAGATTATTCATTCAGGCCTTCTATAAGACAAGTGATTCAGGTGCTCAAATTTGAGTCTCCTTTACCAATTCTCCCAGAAAAAATGCCTGTGCCAACCTATCTTCCTCCAACAATTAAAGCACTTTTTTCTTCAATTTCATCCACCTATTGGACGAAAATTTAG	1938	0.3963	MTPLHAILHTQTLVFCYAIGTISTLQIIHLANSLSFDYPYFNNGDVDWEGDASPYKGAIQMHLWDFNSGKLSDFTTEFSFVIFSKTRDYGDGMAFFLADPNLPLLKKIKEGGGLGLVDGDQVLKSTQHPFVAVEFDTFNNPWDPSGEGTHVGLNFNSMRSNITKPWLTNILEWRIYNCSIKYNSSTLNLRVSFTMYDNDDKPVEEHISHKVDLRDFLPEKVIVGFSAATGRLYEVHTLRSWSFSSSLLSDENRYQIAAPTSSPVISEQGNNIGLKVGLGIGTGLAVSLSGLVCTLLWKRRRGRKREFGFDLNMDDEFQKGSGPKRFFYNELVSATNKFSESDKVGQGGFGGVYKGYLKDLNSYVAIKRMSKESKQGILEYVTEVKVISQLRHRNLVQLLGWCHRKNDFLLIYEFMSNGSLDSHLYGKRSILTWTARYNIALGLASALLYLQEEWEQCVLHRDIKSSNIMLDSCFNAKLGDFGLARLVDHAKGSQTTLIAGTRGYIAPEYFTSGKATKESDIYSFGVVLLEIVTGRKAIEREEKEDQISVVEWVWDLYGFGKFLQAADPKLCGAFDEKQLEHLVVVGLWCVHPDYSFRPSIRQVIQVLKFESPLPILPEKMPVPTYLPPTIKALFSSISSTYWTKI	645

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trre7g03909	645	PANTHER	-	61	610	-	-
	Trre7g03909	645	CDD	STKc_IRAK	344	608	-	-
	Trre7g03909	645	Pfam	Protein kinase domain	339	605	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Trre7g03909	645	Gene3D	-	31	258	-	-
	Trre7g03909	645	SUPERFAMILY	Protein kinase-like (PK-like)	322	630	IPR011009	-
	Trre7g03909	645	ProSitePatterns	Protein kinases ATP-binding region signature.	344	367	IPR017441	GO:0005524
	Trre7g03909	645	ProSitePatterns	Legume lectins beta-chain signature.	131	137	IPR019825	-
	Trre7g03909	645	ProSitePatterns	Legume lectins alpha-chain signature.	217	226	IPR000985	-
	Trre7g03909	645	CDD	lectin_legume_LecRK_Arcelin_ConA	34	237	IPR001220	GO:0030246
	Trre7g03909	645	Gene3D	Phosphorylase Kinase; domain 1	323	414	-	-
	Trre7g03909	645	Gene3D	Transferase(Phosphotransferase) domain 1	415	627	-	-
	Trre7g03909	645	SMART	serkin_6	338	613	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Trre7g03909	645	FunFam	L-type lectin-domain containing receptor kinase IX.1	323	414	-	-
	Trre7g03909	645	Pfam	Legume lectin domain	60	248	IPR001220	GO:0030246
	Trre7g03909	645	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	458	470	IPR008271	GO:0004672\|GO:0006468
	Trre7g03909	645	ProSiteProfiles	Protein kinase domain profile.	338	616	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Trre7g03909	645	SUPERFAMILY	Concanavalin A-like lectins/glucanases	32	253	IPR013320	-
	Trre7g03909	645	FunFam	Lectin-domain containing receptor kinase A4.3	415	627	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Trre7g03909	Trre-Chr7	47315546	47317548	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Trre7g03909	60	625	Receptor kinase-like Gene Family	AT5G10530	50.260	0.0	534

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_L-LEC	Trre7g03909		Pkinase	5.2e-48	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trre7g03909	-		-	gmx:100780181	959.903