Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03909 ATGACTCCTTTGCATGCTATTCTTCACACTCAAACACTTGTTTTTTGTTATGCAATAGGAACCATTTCCACGCTGCAAATAATCCATCTTGCAAACTCACTGTCATTTGATTACCCCTACTTTAACAATGGTGATGTCGATTGGGAAGGTGATGCTTCTCCTTATAAAGGAGCTATTCAAATGCATCTCTGGGATTTCAACTCTGGAAAACTCTCTGACTTCACCACCGAGTTTTCCTTTGTTATTTTTTCAAAAACAAGGGATTATGGAGACGGAATGGCATTCTTCTTGGCCGATCCAAATCTCCCACTTTTGAAGAAGATCAAAGAAGGTGGCGGTCTTGGCCTTGTGGATGGAGACCAAGTACTAAAATCAACTCAACACCCATTTGTGGCAGTAGAGTTCGACACCTTCAATAATCCATGGGACCCTTCAGGTGAAGGCACTCATGTTGGCTTGAATTTCAACTCTATGAGGTCTAACATAACTAAGCCATGGTTGACAAATATTCTTGAATGGAGAATTTATAATTGCAGCATTAAATACAATTCCAGCACTCTCAATTTGAGGGTGTCATTCACCATGTATGATAATGATGATAAACCAGTTGAAGAGCACATATCACATAAGGTTGATTTGAGAGATTTCTTACCTGAGAAGGTTATTGTTGGATTCTCTGCTGCAACAGGAAGATTGTATGAGGTGCATACTCTTCGATCATGGTCATTTAGTTCAAGTCTACTAAGTGATGAGAACAGATATCAGATTGCGGCACCGACCTCCAGTCCTGTAATTTCTGAACAAGGAAATAACATAGGGTTGAAGGTAGGTCTTGGAATTGGTACAGGCTTGGCTGTAAGTTTATCAGGGCTGGTTTGTACTCTATTATGGAAAAGGCGTAGAGGGAGGAAAAGAGAGTTTGGTTTCGATCTCAACATGGATGATGAATTCCAAAAGGGATCTGGACCTAAGAGGTTTTTCTACAATGAACTAGTGAGTGCAACAAACAAATTTTCGGAGTCAGATAAGGTGGGACAAGGTGGTTTTGGTGGTGTATACAAAGGTTATTTGAAAGACCTGAACTCCTATGTTGCTATCAAGAGAATGTCAAAAGAGTCTAAACAGGGAATACTAGAATATGTGACTGAAGTGAAAGTCATTAGTCAATTGAGACACAGAAATCTAGTACAGCTTCTTGGTTGGTGCCACAGGAAGAATGATTTTCTACTAATATATGAGTTTATGTCAAATGGAAGCTTAGATTCCCATCTATACGGTAAAAGAAGCATCTTAACATGGACAGCGAGGTATAACATCGCATTGGGCTTGGCTTCAGCATTGCTTTACCTACAGGAAGAATGGGAGCAGTGTGTGCTTCACAGGGACATTAAATCAAGCAACATTATGTTGGATTCATGTTTTAATGCTAAGCTTGGCGATTTTGGTTTAGCTAGGCTGGTAGATCATGCGAAAGGGTCACAAACCACACTTATAGCTGGAACAAGGGGTTATATTGCACCTGAATATTTCACATCAGGAAAGGCTACTAAAGAATCTGATATATACAGCTTTGGTGTAGTGTTATTGGAAATAGTCACTGGTAGGAAAGCTATTGAAAGAGAAGAAAAGGAAGATCAAATAAGTGTAGTTGAGTGGGTTTGGGATCTCTATGGATTTGGAAAGTTCCTTCAAGCAGCTGACCCTAAGTTATGTGGAGCATTTGATGAGAAGCAATTGGAACATTTGGTAGTTGTTGGCCTTTGGTGTGTTCATCCAGATTATTCATTCAGGCCTTCTATAAGACAAGTGATTCAGGTGCTCAAATTTGAGTCTCCTTTACCAATTCTCCCAGAAAAAATGCCTGTGCCAACCTATCTTCCTCCAACAATTAAAGCACTTTTTTCTTCAATTTCATCCACCTATTGGACGAAAATTTAG 1938 0.3963 MTPLHAILHTQTLVFCYAIGTISTLQIIHLANSLSFDYPYFNNGDVDWEGDASPYKGAIQMHLWDFNSGKLSDFTTEFSFVIFSKTRDYGDGMAFFLADPNLPLLKKIKEGGGLGLVDGDQVLKSTQHPFVAVEFDTFNNPWDPSGEGTHVGLNFNSMRSNITKPWLTNILEWRIYNCSIKYNSSTLNLRVSFTMYDNDDKPVEEHISHKVDLRDFLPEKVIVGFSAATGRLYEVHTLRSWSFSSSLLSDENRYQIAAPTSSPVISEQGNNIGLKVGLGIGTGLAVSLSGLVCTLLWKRRRGRKREFGFDLNMDDEFQKGSGPKRFFYNELVSATNKFSESDKVGQGGFGGVYKGYLKDLNSYVAIKRMSKESKQGILEYVTEVKVISQLRHRNLVQLLGWCHRKNDFLLIYEFMSNGSLDSHLYGKRSILTWTARYNIALGLASALLYLQEEWEQCVLHRDIKSSNIMLDSCFNAKLGDFGLARLVDHAKGSQTTLIAGTRGYIAPEYFTSGKATKESDIYSFGVVLLEIVTGRKAIEREEKEDQISVVEWVWDLYGFGKFLQAADPKLCGAFDEKQLEHLVVVGLWCVHPDYSFRPSIRQVIQVLKFESPLPILPEKMPVPTYLPPTIKALFSSISSTYWTKI 645
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03909 645 PANTHER - 61 610 - -
Trre7g03909 645 CDD STKc_IRAK 344 608 - -
Trre7g03909 645 Pfam Protein kinase domain 339 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g03909 645 Gene3D - 31 258 - -
Trre7g03909 645 SUPERFAMILY Protein kinase-like (PK-like) 322 630 IPR011009 -
Trre7g03909 645 ProSitePatterns Protein kinases ATP-binding region signature. 344 367 IPR017441 GO:0005524
Trre7g03909 645 ProSitePatterns Legume lectins beta-chain signature. 131 137 IPR019825 -
Trre7g03909 645 ProSitePatterns Legume lectins alpha-chain signature. 217 226 IPR000985 -
Trre7g03909 645 CDD lectin_legume_LecRK_Arcelin_ConA 34 237 IPR001220 GO:0030246
Trre7g03909 645 Gene3D Phosphorylase Kinase; domain 1 323 414 - -
Trre7g03909 645 Gene3D Transferase(Phosphotransferase) domain 1 415 627 - -
Trre7g03909 645 SMART serkin_6 338 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g03909 645 FunFam L-type lectin-domain containing receptor kinase IX.1 323 414 - -
Trre7g03909 645 Pfam Legume lectin domain 60 248 IPR001220 GO:0030246
Trre7g03909 645 ProSitePatterns Serine/Threonine protein kinases active-site signature. 458 470 IPR008271 GO:0004672|GO:0006468
Trre7g03909 645 ProSiteProfiles Protein kinase domain profile. 338 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g03909 645 SUPERFAMILY Concanavalin A-like lectins/glucanases 32 253 IPR013320 -
Trre7g03909 645 FunFam Lectin-domain containing receptor kinase A4.3 415 627 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Trre7g03909 Trre-Chr7 47315546 47317548 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g03909 60 625 Receptor kinase-like Gene Family AT5G10530 50.260 0.0 534
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Trre7g03909 Pkinase 5.2e-48 CL0016
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03909 - - gmx:100780181 959.903