Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03894 ATGATGAGTGCTAACTTGCATCAACTATTAAGAAGCCTCTGTTTGGAGACTGATTGGAAGATCTTGACATGGGAGGATGTTTACTATGACAATCCTGATAATTGTGATTCTTCCCTCAAATCATGCATATTCGTTGGGGAAGGTATTGTTGGACAAGTAGCAGTTACTGGAAAGCATCAATGGATCTGTGCGGATTATCAAATTACAAGTTCTGGCCCATCTTTTAAGTTTGCTGATTGA 240 0.3917 MMSANLHQLLRSLCLETDWKILTWEDVYYDNPDNCDSSLKSCIFVGEGIVGQVAVTGKHQWICADYQITSSGPSFKFAD 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03894 79 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 2 76 IPR043561 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03894 Trre-Chr7 47148752 47149452 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g03894 2 62 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 34.483 5.26e-09 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03894 - - gmx:100777740 103.99