Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03893 ATGGATACCTATCAATATCCACCTTCATATCCAGATTCCGGTAACTCATCACCGCGTTCGAGAGAAATCGATTTCGATAATCCCTCTTCATGGGAAGAGCAACAGAGTTACAAAGCAAAGTTCATGTGCAGTTACGGTGGAAAGATCCAACCACGCAGCCACGACAACCAGCTTTCCTATATCGGCGGCGACACCAAAATACTAGCCGTCGATCGTAACATCAAGTTTCAAGCCTTTCTCTCGAAGCTATCAACTCTCTGCGACGCAATTCAACAAGATGTAACGTTTAAGTACCAGCTTCCCGGTGAAGAACTCGATGCTCTTATCTCCGTTACGACGGAAGATGATCTCGAACACATGATGCATGAATACGATCGTCTCTATCGTCCTTCTTCAAAACCGGTTAGAATGAGGCTTTTTATATTTATCTCTCCGAATTCGGGTTCGGTTTCGGTTTCTCAACCCGATCCACTTAAACCTCATTCCAACGCTGATTTTCTCTTTGGTCTTGATAACAAAACCATAGCTCCACCGTCTCATCCTCCTTCATATGCTGCTGCTGTGAAGTATCATGATCCTGTACCGGATCTTGTTGCTCCGGTAACTGAGTATCCGCCACGTGGAGTTGTTGATGATAGTGTTGAGATTCAGAGGCAGTTACAGCGTTTGCAGGTTTCTGAAGGTGAGCAAAACTTGTATCGGAGAAGTGTAGATGGATTCACCGGAGGTTTTGCCACTGCCGCTACCGTTGCTGCTCCTGGAGGTGATTATTACATGCAAAAGCTGCCGGAGAAAGTTGCGCCGTCGAATTCTCCAACTGCTGTTCATCATCCCGCAGGTTACTGGCCGGAAAAGCAATTTTCCGGCGAAGGTTTTCCGATGCCGGGGATAAACAGCTCTGGTGGAGGGGATCAGCAAGTTTACATGATGCCGCCGCCGGGGACATTTTACCACGCGCCTCAGATGATGCGTCCACCGACGGCGCAGGTGAGTCAGGGGTACTACGCTGTGCAGCGAATGTCTACTGATGGATACCGGGAACAGCCGGTTTACGGCGGAATTCCGCCTCAGAGCGTGGCGTTTTCGTCGGCGGGTCAAGGGAGTTTGGCACCGGCTCAGTCAGTCAAACCTTCGGCTTATGCGGAAGGATACGGCTTAGTTAGGCCAGCTGGCGTAGCGGATAATTCGGGCAGTGGTGGCTATGCGCAAGTGGCGTATGATAGTGCAAGTGGGAGACATGTTTATTATACTGCGCCGGGAGGTGTGGTACATGCGCCGCAGTATCAAGGGGTTGCTCCGGTATTCAGCAATGATATGAGAACGGCTGCAGCTCCTGTGGGCCAGGATCCTAAAGTGGTAAACAAAAGTTCACAAGGATCTGTGTGA 1386 0.4986 MDTYQYPPSYPDSGNSSPRSREIDFDNPSSWEEQQSYKAKFMCSYGGKIQPRSHDNQLSYIGGDTKILAVDRNIKFQAFLSKLSTLCDAIQQDVTFKYQLPGEELDALISVTTEDDLEHMMHEYDRLYRPSSKPVRMRLFIFISPNSGSVSVSQPDPLKPHSNADFLFGLDNKTIAPPSHPPSYAAAVKYHDPVPDLVAPVTEYPPRGVVDDSVEIQRQLQRLQVSEGEQNLYRRSVDGFTGGFATAATVAAPGGDYYMQKLPEKVAPSNSPTAVHHPAGYWPEKQFSGEGFPMPGINSSGGGDQQVYMMPPPGTFYHAPQMMRPPTAQVSQGYYAVQRMSTDGYREQPVYGGIPPQSVAFSSAGQGSLAPAQSVKPSAYAEGYGLVRPAGVADNSGSGGYAQVAYDSASGRHVYYTAPGGVVHAPQYQGVAPVFSNDMRTAAAPVGQDPKVVNKSSQGSV 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03893 461 SUPERFAMILY CAD & PB1 domains 54 151 - -
Trre7g03893 461 Gene3D - 59 143 - -
Trre7g03893 461 PANTHER OS05G0427100 PROTEIN-RELATED 10 342 - -
Trre7g03893 461 Pfam PB1 domain 54 141 IPR000270 GO:0005515
Trre7g03893 461 SMART PB1_new 53 144 IPR000270 GO:0005515
Trre7g03893 461 CDD PB1_UP2 42 142 - -
Trre7g03893 461 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03893 Trre-Chr7 47143111 47144496 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g03893 37 145 MAP Kinase Kinase Kinase AT5G57610 42.202 1.03e-23 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03893 - - psat:127106335 788.875
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g03893 7 47143111 47144496 Trre3g00284 3 1899519 1900886 PCT