Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03885 ATGGCCTCTCAAATTGGAGCAAAAACTAATGGAATTTCACCAAACAGTTTTCAAATTGAGATTCCTATCCATACCAATAGTACTACTACTATAGTAGATAAAAAACAGAACCAAAGTATTGATGAAAATGAGAGTAATAACATTGATTACTCTCAAAGAGCACAATGGCTTAGAGCAGCCATGTTAGGTGCCAATGATGGATTAATCACTGTTGCTTCATTGATGATCGGTATTGGAGCTATAAAAGAAGATATTAGTGTAATGCTCCTTGCTGGTTTCGCCGGTTTAGTAGCTGGTGCTTGTAGCATGGCAATTGGTGAGTTTGTATCTGTTTATACTCAATATGACATTGAGATAGCTCAAATGAAAAGAGAAAGTGAATTATCAAAGAATGATGATGATGATGATGAAGAAAGTAGTAAAAGAGAGAAATTGCCAAATCCATTTCAAGCGGCATTAGCATCAGCACTTGCATTTTCTGTTGGTGCTCTAATGCCATTGGTAGCAGCTGCATTTATAAAGAATCATAAGATTAGAATGGGTGTTGTTGCTGCTGTGGTTAGTTTTGCATTGTTGGTGTTTGGATCAGTGGGAGCATTGATTGGAAAAACTCCAATTATGAGGTCTTGTGTTAGAGTGCTTATTGGTGGTTGGATGGCTATGGCTATTACTTTTGGTGTCACCAAATTGATTGGCACTACTGGAATTTGA 711 0.3713 MASQIGAKTNGISPNSFQIEIPIHTNSTTTIVDKKQNQSIDENESNNIDYSQRAQWLRAAMLGANDGLITVASLMIGIGAIKEDISVMLLAGFAGLVAGACSMAIGEFVSVYTQYDIEIAQMKRESELSKNDDDDDEESSKREKLPNPFQAALASALAFSVGALMPLVAAAFIKNHKIRMGVVAAVVSFALLVFGSVGALIGKTPIMRSCVRVLIGGWMAMAITFGVTKLIGTTGI 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03885 236 MobiDBLite consensus disorder prediction 126 145 - -
Trre7g03885 236 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 34 231 IPR008217 GO:0005384|GO:0030026
Trre7g03885 236 Pfam VIT family 57 137 IPR008217 GO:0005384|GO:0030026
Trre7g03885 236 Pfam VIT family 141 228 IPR008217 GO:0005384|GO:0030026
Trre7g03885 236 MobiDBLite consensus disorder prediction 126 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03885 Trre-Chr7 47050499 47051209 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g03885 37 236 Nodulin-like Gene Family AT3G43660 62.000 3.77e-93 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03885 K22736 - gmx:100802489 304.293