Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03883 ATGGTTGTTGGTGCAATTTGTGATTCTGAGTCACTAAACCATGCAGTCACAATTCCAAATCCTACAAAGGAAATGGAAGAAAAACAAATTCAAATCACAAAAGAAAATAATAACAATAGCAATGTTGATTATTGGCAAAGAGCTCAATGGCGCCGTACTAGAAAAGAAAAGGAATTGGAAATTGAGTTGGAGAAAAGGAAATCATTGCCCAATCCATTACAAGCTGCTTTAGCTTCTGCATTCTCATTTTCTATAGGTGGTTTGGTTCCTTTACTTAGTGGTTCATTTATAAGTGATTATAAGATAAGGCTTATTGTGATTGTTTCAATAGCTAGTTTGGCTTTGGTTGTTTTTGGAAGAGTTGGTGCTATGCTTGGTAAGACACCAAAAATGAAATCTTCTATTAGGTTTCTTTTTGGTGGATGGATGGCTATGGCAATAACTTTTGGGTTAACCAAATTACTTGCACATTCTAGTGGTTTGGATTTATGA 492 0.3496 MVVGAICDSESLNHAVTIPNPTKEMEEKQIQITKENNNNSNVDYWQRAQWRRTRKEKELEIELEKRKSLPNPLQAALASAFSFSIGGLVPLLSGSFISDYKIRLIVIVSIASLALVVFGRVGAMLGKTPKMKSSIRFLFGGWMAMAITFGLTKLLAHSSGLDL 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03883 163 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 26 156 IPR008217 GO:0005384|GO:0030026
Trre7g03883 163 Pfam VIT family 27 152 IPR008217 GO:0005384|GO:0030026
Trre7g03883 163 Coils Coil 47 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03883 Trre-Chr7 47047759 47048250 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g03883 65 161 Nodulin-like Gene Family AT3G43660 56.701 1.67e-33 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03883 K22736 - gmx:100791523 137.502