Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03857 ATGTCAGCTTCTGGCTCATGGAGTTTTGAGGAGAATAAGGCCTTTGAAAGAGCTATAGTTGTATATGACAAAGATACTCCTGATCGTTGGTACAATGTAGCTCATGCTGTTGGTGACAAAACTCCAGAGGAAGTTAAGAAACACTATGAACTTCTTGTTGAAGATATTGAACTTATCGAGTCAGGGAAAGTTCCACTCCCAAATTACAAGAAAATTTCAGCTTCTCATGAGGAGAAAAAGGATGAGGAACCTAAACCTTCATTAACTAACAACTGTCATCAGTTATAA 288 0.3785 MSASGSWSFEENKAFERAIVVYDKDTPDRWYNVAHAVGDKTPEEVKKHYELLVEDIELIESGKVPLPNYKKISASHEEKKDEEPKPSLTNNCHQL 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03857 95 MobiDBLite consensus disorder prediction 69 95 - -
Trre7g03857 95 ProSiteProfiles Myb-like domain profile. 1 53 IPR001005 -
Trre7g03857 95 ProSiteProfiles SANT domain profile. 2 57 IPR017884 -
Trre7g03857 95 SUPERFAMILY Homeodomain-like 5 60 IPR009057 -
Trre7g03857 95 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 3 81 IPR044636 GO:0003700
Trre7g03857 95 Gene3D - 1 66 - -
Trre7g03857 95 MobiDBLite consensus disorder prediction 72 87 - -
Trre7g03857 95 SMART sant 3 55 IPR001005 -
Trre7g03857 95 CDD SANT 6 53 IPR001005 -
Trre7g03857 95 Pfam Myb-like DNA-binding domain 5 49 IPR001005 -
Trre7g03857 95 FunFam Transcription factor SRM1 1 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03857 Trre-Chr7 46877023 46877622 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Trre7g03857 Myb_DNA-binding 1e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03857 - - gmx:778061 130.568