Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03844 ATGAGGAAAAATAAGAAAACAGGAGAGGTGAGCAAATTGCCTAATCAGGACTTGAAACAACAAAAGATCAAAGAGGAACATAAACTAAAGAAATTCAGACAAAAAGAAAAAATGTTGCCTGTGGAGTTTCTAGAGAAAAGAGTACAGATCAATAAAGTTGGACTATCGGCTTATAGAATAAACTTCACAAAACTTTGTCGTGCAACAAACTACTTCAGTAAGGACAATGTTATTGGGGTGGGGGTGATTGGAATAATGTACAAAGCAACATTTCCCAACAATTGTTTCTTGGCAGTTAAGAAACTACATGATTCTCAATTGTGTATCAAAAGGTTTGAGCTAGAAATAATGATTTTGGGAAAATATAGTCACCAAAACATACTTCCCTTGATTGGATTCTGCATAGAAGAAGAAAAAAATGAAAGAATTTTGGTGTATCAATACATGTCAAATGGAAGACTTTCTGATTGGTTAAATGATGATACTACAAAATTAGGATGGACAAGGGTTATTAAAATTGCACTTGGTGTAGCAAGAGGTTTATGTTGTCTCCATCATAGTTTGCATATGGTTCATCTTAGTATAGGCTTAGAGTGTATCTTGTTAGGGGACAATTTCGAGGCGAAAATATCCAATTTTGGAGGAGTCATGTTTACCAATAATGATTTGAACAAAAACATTGAGAAGAAGGATGTTTATGACTTTGGTTGTTTGCTTTTTGATTTGATTAAGGGGGAGAAATTTGGCCAAAGACATGATTGTTTAAGCAATAATAATGTTCCGTTCGCGACGTACACATATCCAAATCCTATTAACCTATTGGAGGACCATTTTGGGTTCTATGATGTAATGGATGAAACACTAAACAAGATAGAATTTCAAGATGAGGTATCTTCTCTTCTTAGAGTTGCATGTGATTGTGTTCATCCTATCCTTGAAAAAAGGCCTACTATGCTTGAGGTGTACAATAAGATGGGAAACATATGGGAGAAAGATGAGATTTTTGAAGATCATGACCAATTTGGCCTAATGCATAACTCTTAA 1044 0.3448 MRKNKKTGEVSKLPNQDLKQQKIKEEHKLKKFRQKEKMLPVEFLEKRVQINKVGLSAYRINFTKLCRATNYFSKDNVIGVGVIGIMYKATFPNNCFLAVKKLHDSQLCIKRFELEIMILGKYSHQNILPLIGFCIEEEKNERILVYQYMSNGRLSDWLNDDTTKLGWTRVIKIALGVARGLCCLHHSLHMVHLSIGLECILLGDNFEAKISNFGGVMFTNNDLNKNIEKKDVYDFGCLLFDLIKGEKFGQRHDCLSNNNVPFATYTYPNPINLLEDHFGFYDVMDETLNKIEFQDEVSSLLRVACDCVHPILEKRPTMLEVYNKMGNIWEKDEIFEDHDQFGLMHNS 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03844 347 Pfam Protein tyrosine and serine/threonine kinase 75 323 IPR001245 GO:0004672|GO:0006468
Trre7g03844 347 ProSiteProfiles Protein kinase domain profile. 72 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g03844 347 SUPERFAMILY Protein kinase-like (PK-like) 55 323 IPR011009 -
Trre7g03844 347 Coils Coil 15 35 - -
Trre7g03844 347 PANTHER OS01G0253100 PROTEIN 28 326 - -
Trre7g03844 347 Gene3D Transferase(Phosphotransferase) domain 1 149 225 - -
Trre7g03844 347 Gene3D Transferase(Phosphotransferase) domain 1 226 342 - -
Trre7g03844 347 Gene3D Phosphorylase Kinase; domain 1 33 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03844 Trre-Chr7 46585040 46586962 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g03844 46 346 Receptor kinase-like Gene Family AT1G27190 30.330 1.64e-36 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Trre7g03844 PK_Tyr_Ser-Thr 4.7e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03844 - - tpra:123911597 433.721