Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03843 ATGGAATTCTCTAAACAATTCAAAGATTCATTTAGGCAAGGCCTTATTGCTGGCTATATTTTCACAGCAACATTTGTCATTGTTTTTTATATGTCCTATTGTCTACCCACACAAATTATCAAGATGAGGAAAAATAAGAAAACAGGAGAGGTGAGCAAATTGCCTAATCAGGACTTGAAACAACAAAAGATCAAAGAGGAACATAAACTAAAGAAATTCAGACAAAAAGAAAAAATGTTGCCTGTGGAGTTTCTAGAGAAAAGAGTACAGATCAATAAAGTTGGACTATCGGCTTATAGAATAAACTTCACAAAACTTTGTCGTGCAACAAACTACTTCAGTAAGGACAATGTTATTGGGGTGGGGGTGATTGGAATAATGTACAAAGCAACATTTCCCAACAATTGTTTCTTGGCAGTTAAGAAACTACATGATTCTCAATTGTGTATCAAAAGGTTTGAGCTAGAAATAATGATTTTGGGAAAATATAGTCACCAAAACATACTTCCCTTGATTGGATTCTGCATAGAAGAAGAAAAAAATGAAAGAATTTTGGTGTATCAATACATGTCAAATGGAAGACTTTCTGATTGGTTAAATGATGATACTACAAAATTAGGATGGACAAGGGTTATTAAAATTGCACTTGGTGTAGCAAGAGGTTTATGTTGTCTCCATCATAGTTTGCATATGGTTCATCTTAGTATAGGCTTAGAGTGTATCTTGTTAGGGGACAATTTCGAGGCGAAAATATCCAATTTTGGAGGAGTCATGTTTACCAATAATGATTTGAACAAAAACATTGAGAAGAAGGATGTTTATGACTTTGGTTGTTTGCTTTTTGATTTGATTAAGGGGGAGAAATTTGGCCAAAGACATGATTGTTTAAGCAATAATAATGTTCCGTTCGCGACGTACACATATCCAAATCCTATTAACCTATTGGAGGACCATTTTGGGTTCTATGATGTAATGGATGAAACACTAAACAAGATAGAATTTCAAGATGAGGTATCTTCTCTTCTTAGAGTTGCATGTGATTGTGTTCATCCTATCCTTGAAAAAAGGCCTACTATGCTTGAGGTGTACAATAAGATGGGAAACATATGGGAGAAAGATGAGATTTTTGAAGATCATGACCAATTTGGCCTAATGCATAACTCTTAA 1167 0.3428 MEFSKQFKDSFRQGLIAGYIFTATFVIVFYMSYCLPTQIIKMRKNKKTGEVSKLPNQDLKQQKIKEEHKLKKFRQKEKMLPVEFLEKRVQINKVGLSAYRINFTKLCRATNYFSKDNVIGVGVIGIMYKATFPNNCFLAVKKLHDSQLCIKRFELEIMILGKYSHQNILPLIGFCIEEEKNERILVYQYMSNGRLSDWLNDDTTKLGWTRVIKIALGVARGLCCLHHSLHMVHLSIGLECILLGDNFEAKISNFGGVMFTNNDLNKNIEKKDVYDFGCLLFDLIKGEKFGQRHDCLSNNNVPFATYTYPNPINLLEDHFGFYDVMDETLNKIEFQDEVSSLLRVACDCVHPILEKRPTMLEVYNKMGNIWEKDEIFEDHDQFGLMHNS 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03843 388 Gene3D Phosphorylase Kinase; domain 1 67 189 - -
Trre7g03843 388 PANTHER OS01G0253100 PROTEIN 67 367 - -
Trre7g03843 388 Pfam Protein tyrosine and serine/threonine kinase 116 364 IPR001245 GO:0004672|GO:0006468
Trre7g03843 388 Gene3D Transferase(Phosphotransferase) domain 1 269 383 - -
Trre7g03843 388 Gene3D Transferase(Phosphotransferase) domain 1 190 268 - -
Trre7g03843 388 Coils Coil 56 76 - -
Trre7g03843 388 SUPERFAMILY Protein kinase-like (PK-like) 96 364 IPR011009 -
Trre7g03843 388 ProSiteProfiles Protein kinase domain profile. 113 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03843 Trre-Chr7 46585040 46587085 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g03843 14 369 Receptor kinase-like Gene Family AT5G07280 30.155 3.23e-36 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Trre7g03843 PK_Tyr_Ser-Thr 6.5e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03843 - - tpra:123911597 491.115