Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03841 ATGGCTTTTCAAATAAAAAGTGATATTCTACTCCAATTCTTCTTGTGCCTCAGTATGTTAATGACAAGTCAGAGTTCTGTGACTGATAACATTAAGAATACCTTGGAAAACAAGTCCAACGATTTCTGTCAATCGTTCACAGTTGCTTTTATTGTTGGTTATGTTTTTTCACTCTCTTTGTACTGTTATGTGGTGCATCAGTTGAAGAAGAAAAAGAAAAACAATCACCTAAACAAAGCTAAAGAATTGGTCAAATATATTTGCTTCATCACCAGAAGGAGGAAACAAATGGTAGTTAGTCAGATGCACAAATTGATAAATTTCCGGCAGATACGCAAAGAAAGCAAAGAGATATCTGTTTTATTGGAAAGACTCACATCGACAATATGGTTAGAAGAACTTTCTGCTGCAACAGACTGTTTTGCTGTAGACAATGCCATTGGGGTGGGAAAGATGGGAATGATGTATCAAGGAAAACTACCTAATGGTCAATTACTAGCTGTTAAGAGACTATTAAACTCTCAATTATTTAAAAGGCAGTTCCTTTCGGAAACAACGATTTTGTGCAAGTACAGACACAAAAATATAGTTCCCTTGCTTGGTTTCTGCATTGAAGGAAATGACAGGCTTTTGGCATATCCATACATGTCAAATGGAAGGCTTTCCAAATGGTTACATCCATTGAAAAGTGAAGTTGTGAGATTGAAATGGCCTCAAAGAGCCAACATTGCACTTGGAATAGCAAGAGGGTTATCATGGCTTCATCATATATGTGATTTGCATACTGTGCATTTTAATATATGCTCACAATCTATATTGCTTGATGAGAATTTTGAACCCAAAATATCTAATTTTGGGGATGCCAAATTTATGAATCCCAACAATGAGGATGATCTTGGCAAAATGTTTAAGGTAAATGACAGGAAGACGAAGAAAGATGTGTATGACTTTGGAAGTGTGCTTTTTGAACTGATTACAGGAGAAACATATGATGAACTGACTCGTTCATGCACCAAAACTAATATATGTGGTAACCCTTCAAATTTCTATAATGCAATCGATAAATCTTTAACTGGGGAAGGATTTGAAAATGAAGTTTGTGCTGTTCTAAAGATTGCTTGTGAATGTGCTAAGCCTTTACCAGATCAAAGACCAACAATGCTTGAAGTTTACAAGAATATAAGCAATGTAAAGAAGGGGCGACATGGCTGTAGTGTGTTGGAACAAAGTGGGTCTGACATGAACCTCTAA 1251 0.3605 MAFQIKSDILLQFFLCLSMLMTSQSSVTDNIKNTLENKSNDFCQSFTVAFIVGYVFSLSLYCYVVHQLKKKKKNNHLNKAKELVKYICFITRRRKQMVVSQMHKLINFRQIRKESKEISVLLERLTSTIWLEELSAATDCFAVDNAIGVGKMGMMYQGKLPNGQLLAVKRLLNSQLFKRQFLSETTILCKYRHKNIVPLLGFCIEGNDRLLAYPYMSNGRLSKWLHPLKSEVVRLKWPQRANIALGIARGLSWLHHICDLHTVHFNICSQSILLDENFEPKISNFGDAKFMNPNNEDDLGKMFKVNDRKTKKDVYDFGSVLFELITGETYDELTRSCTKTNICGNPSNFYNAIDKSLTGEGFENEVCAVLKIACECAKPLPDQRPTMLEVYKNISNVKKGRHGCSVLEQSGSDMNL 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03841 416 ProSiteProfiles Protein kinase domain profile. 141 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g03841 416 Pfam Protein tyrosine and serine/threonine kinase 143 393 IPR001245 GO:0004672|GO:0006468
Trre7g03841 416 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 87 397 - -
Trre7g03841 416 SUPERFAMILY Protein kinase-like (PK-like) 121 392 IPR011009 -
Trre7g03841 416 Gene3D Phosphorylase Kinase; domain 1 99 215 - -
Trre7g03841 416 Gene3D Transferase(Phosphotransferase) domain 1 216 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03841 Trre-Chr7 46578525 46580418 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g03841 48 405 Receptor kinase-like Gene Family AT1G27190 32.987 1.27e-54 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Trre7g03841 PK_Tyr_Ser-Thr 3.4e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03841 - - tpra:123918107 734.947