Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03840 ATGGCTGTCCAAATAAAAAGGGATATTCTCTTGCTTACCTTCTTTCTGTGCTCGTTGCTCAGTATCTTAATGATAAGTCATGGTACTGAGAGTGATATCATTTGTTTAAAATCCTTTAAGAATTCCTTGGAAGACCCAAATGATTACTTAACCTCAAGCTGGAACTTCAACAACAATACGGAAGGTTACATATGTAGATTCAATGGTGTTGAATGTTGGCATCCTGATGAGAATAGGGTACTAAATCTCAAACTATCGAACATGGGACTGAAGGGCCAGTTTCCGCGGGGAGTTGTGAATTGCACTTCGATGACAGGCTTAGACCTTTCAGTCAACAATCTTTCAGGACCCATTCCATCTGATATATCAGAAATACTCACATTTGTTACCAGCATTGATCTCTCTAGTAACAAATTCATCGGTGAAATTCCAACAGCTTTAGCAAATTGTACTTACCTGAACACTCTTAAACTTGACGACAATATGCTAACAGGTGAAATTCCATTAGAACTTGGTCAGCTTCCCAGGATTAGAACGATTTCTTTTTCTAACAATCAATTGTATGGGCAAGTGCCAATGTTCAACAACTTAGTAGAAGTTAGCTATGCTAACAATAGAGGACTTTGTGGAGGGTCTTTGAGACCTTGCTCCTCGACACGTGACAAGCAAGACGATTTCCATCAATCGTTCAAAGGAGGTCTAATTGTTGGTTATGTTTTTTCATTCATTTTTTCTGTTATGATCACTTGTATGTTCTACTCAAAATGTGCACATTGGGTGCATCAATTGAAGAAGAGAAAAAACATCCCTCTAAACAAAGCCAAAGAATTGGGCAAATATATTTGCTCCATCACAAGTAAGAGAACACATACAGTAGTTAATCAGATGCATGAATTGTTAAATTCACGAACGTTACACAAAGAAAGAAAAGAGATCTCTGTACTATTGGAAAGACTGATATCAACAATATGGTTAGAAGAACTGCGTGATGCAACTGACTGTTTCTCTATGGACAATGCCATCGGCGTAGGAAAGATGGGAATGATGTACCAAGCAACTCTATCTAATGGTCAGTTACTAGCTGTTAAGAGACTATTTGACTCTGAGTTGTTTAAAAGGCATTTCCTTTTAGAAACAATGATTTTGGGTAGGTACATACACAACAATATAGTTCCCCTGCTCGGGTTCTTCATTGAGGGAAAGGAAAGGCTTTTGGCATACCCATACATGTCAAATGGAAGGCTTTCCAAATGGTTGCATCCTTTGGAAAGTGAAGTTATAAGATTGAAATGGCATGACAGGATCAACATTGCACTTGGAATAGCAAGAGGATTATCATGGCTACATCATACATGTGATTTGGGCATAGTGCATTTTAACATATGTTCAGAATGCATATTGCTAGATGAGAATTTTGAACCCAAAATATCCAATTTTGGAGAGGCCAAATTTATGAATCCCAACATTGAAGATCATCTAGGAACGATGTTTAAAGTGAATGACGGGAAGAAGGATGTCTATGACTTTGGTAGTGTGCTTTTTGAATTGATGACGGGGAAAACATATAATGAATTGTCACGTTCATATGACACTTCTGATTTATGTGCCAACCCTTTGAGTTTCTATAATGTAATTGATAAATCTTTGACAGGGGAAGGACTGGAAAATGAAGTTTGTACTCTCCTAAAGATTGCTTGCGAGTGTGTTAAGCCTTTACCAGACCAAAGGCCAACAATGCTTGAAGTTTACAACAATATGAACAATGTAAGGAAGGGACAAAATGAATCTGTTAATGATTCTGATACATTAACGGGATTAGAATATGCTTCTTGCATTACTGTAGACGAAATTGTTGAGTTTTAA 1863 0.3736 MAVQIKRDILLLTFFLCSLLSILMISHGTESDIICLKSFKNSLEDPNDYLTSSWNFNNNTEGYICRFNGVECWHPDENRVLNLKLSNMGLKGQFPRGVVNCTSMTGLDLSVNNLSGPIPSDISEILTFVTSIDLSSNKFIGEIPTALANCTYLNTLKLDDNMLTGEIPLELGQLPRIRTISFSNNQLYGQVPMFNNLVEVSYANNRGLCGGSLRPCSSTRDKQDDFHQSFKGGLIVGYVFSFIFSVMITCMFYSKCAHWVHQLKKRKNIPLNKAKELGKYICSITSKRTHTVVNQMHELLNSRTLHKERKEISVLLERLISTIWLEELRDATDCFSMDNAIGVGKMGMMYQATLSNGQLLAVKRLFDSELFKRHFLLETMILGRYIHNNIVPLLGFFIEGKERLLAYPYMSNGRLSKWLHPLESEVIRLKWHDRINIALGIARGLSWLHHTCDLGIVHFNICSECILLDENFEPKISNFGEAKFMNPNIEDHLGTMFKVNDGKKDVYDFGSVLFELMTGKTYNELSRSYDTSDLCANPLSFYNVIDKSLTGEGLENEVCTLLKIACECVKPLPDQRPTMLEVYNNMNNVRKGQNESVNDSDTLTGLEYASCITVDEIVEF 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03840 620 Gene3D Transferase(Phosphotransferase) domain 1 410 611 - -
Trre7g03840 620 Pfam Leucine rich repeat N-terminal domain 31 73 IPR013210 -
Trre7g03840 620 Gene3D Ribonuclease Inhibitor 30 218 IPR032675 -
Trre7g03840 620 FunFam Nuclear pore complex protein NUP107 29 193 - -
Trre7g03840 620 SUPERFAMILY L domain-like 29 203 - -
Trre7g03840 620 ProSiteProfiles Protein kinase domain profile. 335 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g03840 620 Gene3D Phosphorylase Kinase; domain 1 294 409 - -
Trre7g03840 620 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 82 586 - -
Trre7g03840 620 SUPERFAMILY Protein kinase-like (PK-like) 316 584 IPR011009 -
Trre7g03840 620 Pfam Protein kinase domain 337 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03840 Trre-Chr7 46562793 46564770 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g03840 7 601 Receptor kinase-like Gene Family AT3G28450 34.444 9.31e-102 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Trre7g03840 Pkinase 6.1e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03840 - - psat:127106772 892.493