Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03812 ATGGCCAAAACCCTTGCAATGTTGCTTCTCTTCCTCCAACTAACCTCTTTCATTGCATTTTCTGAACACATTGAAACTCTTCCACCAACTTACCCTCCTCATCACTCACCAGCTCCACTTCACCGACCAGTTCATCCACCGTCTAACGCCCCTCACCACCACAATCACACACCTTCCCCCGCTCCTTCCCCTGTTTCTCACACCCTCCTTACCATTCTACCCCTGTACCTGCTAAACCACCTTCCGGTCACTACCACCATCATTACCCTCCTACTCCTGCTCCTCTTCTTGTTCACACCCCTGTTGTTCCAACACATCCACCTTTGCACCCCCTGTTCCAGCTCACTCACCATTGCACCCCCTGCTCCAGTTCACCCACCATTGCATCCTACTCCAATTCCTAGAAGCTTTATAGCTGTTCAAGGTGTTGTTTATGTCAAATCTTGCAAAGTTTTCTCCTCTTCTGTGGTTACCGGCCTGCAATGGAGATCTGAAAATCCATTTGTCCCCATTGCTATGTTTGGAGGTTCAGGAAACTATGCCTCTACTTTGTATATTGCAGCAGTGAATGCTAATGCGGTGGAAAAGGTTGACTCCGAGCCTGCTCCATTCGTAGTGTCGGTAAAGAGTAGTGCCATAACTTCACAGTTTATAAAAGATATATCTGTGAAAAAGGGTGTCAGAGTAAAAACCATCCTGGATATTTCCAGCCAAGCTAAGTTTTCTGATGTTACAAAGAGCTTTCTTGTTCTCCTTGCTGAGAATGGGAGGATTAAAAACGTAGGCATCATTGCAAAGAGGTTTGCGGAGTTGGCAATGGCATATAAGGGAGAAGTGAAAGCAATTGTGACCACTGTTTTGTTTTGGTCCGATTGTTTAGGACGTCTATATGACGATGATCTACTCGACGTCGATAAGTTACATGACGAAGTAGATTGGCGTCATGAAGAAACAATGACCAAAATTGACGATCAAGCCACTGCTGCTGTAGAATCAGCGATTAGTATATACGGAGGAGAATTACAAAAGTTGTCTTCCCAGGAGCTGATTGAATGCGATTCCGAAAATGATGGATGCAATGGCGGTAGCGCAAATAAAGCTTTTGAATACATACGTAAAAATGGTTTACATAAATATGATGGTTATTTGTCTAAAAAGGGTCCGAAAATATATATTGTGGGACAGAAAGAAATACCATTCAAGAATGACAGGGATGACGAAAACCGTCTGAGACATGCCGTTTCCCGTCAGCCCGTTACCGTTTTAATAGCTGTTAGAGACGAGTTCTGCAGTTACAAAGGCAGTCACGGTGTATTTAGGACCGAAACTGAGTTTTGGGTGCCCCATGCTGTTTTGGTCGTAGGTTACAGAGTTTTAGACGAAATAAAATATTAG 1395 0.4401 MAKTLAMLLLFLQLTSFIAFSEHIETLPPTYPPHHSPAPLHRPVHPPSNAPHHHNHTPSPAPSPVSHTLLTILPLYLLNHLPVTTTIITLLLLLLFLFTPLLFQHIHLCTPCSSSLTIAPPAPVHPPLHPTPIPRSFIAVQGVVYVKSCKVFSSSVVTGLQWRSENPFVPIAMFGGSGNYASTLYIAAVNANAVEKVDSEPAPFVVSVKSSAITSQFIKDISVKKGVRVKTILDISSQAKFSDVTKSFLVLLAENGRIKNVGIIAKRFAELAMAYKGEVKAIVTTVLFWSDCLGRLYDDDLLDVDKLHDEVDWRHEETMTKIDDQATAAVESAISIYGGELQKLSSQELIECDSENDGCNGGSANKAFEYIRKNGLHKYDGYLSKKGPKIYIVGQKEIPFKNDRDDENRLRHAVSRQPVTVLIAVRDEFCSYKGSHGVFRTETEFWVPHAVLVVGYRVLDEIKY 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03812 464 Gene3D - 177 269 IPR026015 -
Trre7g03812 464 MobiDBLite consensus disorder prediction 31 62 - -
Trre7g03812 464 MobiDBLite consensus disorder prediction 31 46 - -
Trre7g03812 464 SMART pept_c1 307 462 IPR000668 GO:0006508|GO:0008234
Trre7g03812 464 SUPERFAMILY Cysteine proteinases 302 464 IPR038765 -
Trre7g03812 464 Pfam ATP synthase delta (OSCP) subunit 178 286 IPR000711 GO:0015986|GO:0046933
Trre7g03812 464 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 177 277 IPR026015 -
Trre7g03812 464 Pfam Papain family cysteine protease 310 464 IPR000668 GO:0006508|GO:0008234
Trre7g03812 464 Gene3D Cysteine proteinases 295 464 - -
Trre7g03812 464 PANTHER ATP SYNTHASE DELTA CHAIN 167 286 IPR000711 GO:0015986|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03812 Trre-Chr7 46303435 46310771 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g03812 216 287 Primary Pumps ATPases AT5G13450 51.389 6.54e-17 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03812 K02137 - gmx:100790990 163.696