Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03798 ATGCTAGCAAATGAACTTACATGCCTCCGCGAGGAAGTAAAAAAAGTTACAGAAGATCGTGATCGCATACAAGGACAACTAAATGCTGTAATTTTAGAACGGGAAAAATACATAAAGTTTAAACACGAAACATATTCAAAATTGGATAAATTGCAAATTAAAACAGAGGAGACTTGTTCCTCTCAAAAGGAGAAAATAAAGTTACTGGAGCAAAAGTTACGTGCAGAACGGGAGAAGTTAGAGATGGCTGATTTATCTGCTTTGGAAACAAGCGCAATGTTTGAAGAGCAGAAAAGAATCATACGAGAGCTACGAGATCCGTTGGAAGATAAAGAATTTCAAATAGTTGAAGGAGAAAAGCTAAGGAAAAAACTGCACAACACTGTCTTGGAGCTGAAAGGAAATATTCGCGTGTTTTGTCGTGTGCGACCTTTACTACGAGAGGATCGTTCCGAAACGAACATGGTTGTTTCATACCCAGCATCAATGGAAATGCTTGGCCGGGGAATTGAATTGGTGCATAATGCAGGACAGAAACACCTGTTTACATTTGACAAGGTGTTTAATCATGGCGCCTCTCAACAGGAAGTTTTCACTGAAATATCACAACTGGTGCAAAGTGCGCTTGATGGCTACAAGGTGTGCATTTTTGCTTACGGACAAATGGGTTCAGGAAAAACCTATACAATGATGGGTAGGCCTGACACTCCAGATCTGAAAGGGATGATACCACTTTCTTTAGAACAGATATTCCAGACTAGTCAATCTCTTAAAGATCAGGGCTGGAATTTCAAAATGCAGGCATCAGTGTTGGAAATATATAACGAGACTATCAAGGATTTGTTATTATCAAATCGGTCAAGTGGGTTTGACCAAACACGAACAGAAAATAATGTTCACGGAAAACAGTACACTATTAGACATGACAAAAATGGAAACACGCATGTTTTGGACCTAACTATTGTCGATGTTTGTAGTGCCAATGAGATTTCCTCCCTCCTGCATAAGGCTGCCCAAATCAGGTCAATGGGAAGAACACAAATGAATGAACAATCATCAAGAAGTCACTTTGTCGTTACTTTGCGCATATGTGGTATAAATGAGAACACTGAACAACAAGTACAAGGTGTCTTAAACCTGATTGATTTGGCTGGAAGTGAAAGACTTTCAAGGAGTGGGGCCACTGGAGACAGTTTGAAGGAAACTCAGGCTATCAACCAAAGTCTCTCCTCTTTAAGTAATGTCATATTTGCTTTGGCAAAAAAAGAAGAACATGTTCCTTTTACGGATTCAAAACTGACGCACCTACTCCAGCCATGTCTTGAAGGGGATTCCAAAACTTTGATGTTTGTCAACATATCACCTGATCAATCTTCAATTGATGAGTCACTTTGCTCTCTCCGCTTTGCAGCTAGAGTCAATGCTGTGAAATTGGGGTTTCAGAGTGTGAGACCTAGACATCTACATGGTACTTAG 1476 0.3991 MLANELTCLREEVKKVTEDRDRIQGQLNAVILEREKYIKFKHETYSKLDKLQIKTEETCSSQKEKIKLLEQKLRAEREKLEMADLSALETSAMFEEQKRIIRELRDPLEDKEFQIVEGEKLRKKLHNTVLELKGNIRVFCRVRPLLREDRSETNMVVSYPASMEMLGRGIELVHNAGQKHLFTFDKVFNHGASQQEVFTEISQLVQSALDGYKVCIFAYGQMGSGKTYTMMGRPDTPDLKGMIPLSLEQIFQTSQSLKDQGWNFKMQASVLEIYNETIKDLLLSNRSSGFDQTRTENNVHGKQYTIRHDKNGNTHVLDLTIVDVCSANEISSLLHKAAQIRSMGRTQMNEQSSRSHFVVTLRICGINENTEQQVQGVLNLIDLAGSERLSRSGATGDSLKETQAINQSLSSLSNVIFALAKKEEHVPFTDSKLTHLLQPCLEGDSKTLMFVNISPDQSSIDESLCSLRFAARVNAVKLGFQSVRPRHLHGT 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03798 491 ProSitePatterns Kinesin motor domain signature. 376 387 IPR019821 GO:0003777|GO:0005524|GO:0007018
Trre7g03798 491 FunFam Kinesin-like protein 81 478 - -
Trre7g03798 491 Pfam Kinesin motor domain 141 475 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre7g03798 491 PANTHER KINESIN-LIKE PROTEIN KLP-3 6 479 IPR027640 GO:0003777|GO:0007018
Trre7g03798 491 Coils Coil 59 86 - -
Trre7g03798 491 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 95 475 IPR027417 -
Trre7g03798 491 Coils Coil 6 26 - -
Trre7g03798 491 PRINTS Kinesin heavy chain signature 211 232 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre7g03798 491 PRINTS Kinesin heavy chain signature 377 395 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre7g03798 491 PRINTS Kinesin heavy chain signature 426 447 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre7g03798 491 PRINTS Kinesin heavy chain signature 346 363 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre7g03798 491 ProSiteProfiles Kinesin motor domain profile. 135 476 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre7g03798 491 SMART kinesin_4 133 484 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre7g03798 491 CDD KISc_C_terminal 133 478 - -
Trre7g03798 491 Gene3D Kinesin motor domain 82 478 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03798 Trre-Chr7 46102903 46113703 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g03798 55 476 Calmodulin-binding Proteins AT5G65930 34.793 6.15e-75 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03798 K10405 - gmx:100818473 679.093